| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_2003 |
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| Symbol | |
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| ID | 4569530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | - |
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| Start bp | 2317575 |
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| End bp | 2319692 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639766585 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_912440 |
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| Protein GI | 119357796 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only
[S] Function unknown |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
[COG3347] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAACC TTTGGAACGA CAATGATTTT CAGCGTTTTG TGCAGGCGCA GAAAAACGTG
AACGACACGA CTTCAGAACT TGCGGAACTG GTCTACGCTT CCCGGCTGCT TGGGAGGGAG
AGCTCTCTGG TGATGCATGG CGGCGGTAAT ACTTCGGTAA AAAATGACCT GCACGATATT
ATCGGCAATA CTGTCAATGT TATTTACATC AAAGGCAGCG GCATTGATCT TGCTGATGTC
GAGGCTTATG ACTTTACGGC GGTCCGTCTG GAGCCGTTGC GGAAGCTTCA GCATCTCTAT
GCAACGGGGG AGAGGCGGAG CGACGAGGAT ATTCGCAGGT TTTCGACAAG CGAATTCAAG
CATTTTCTCT ATCTGAATCT CTTTCAGCTC ACGGATCACA TTGTGAGCAA TTCGCTTTCG
CCCTCAATTG AGACGCTGTT GCATGCGTTT CTTCCGCACC GCTATATTTT TCATACGCAC
TCGTTGGCGT TGCTTACTCT GAGCAATCAG GCGGATGGCG GGGCGCGGGT TCGCGATGAG
TTTGGCGATG AGTTTGGTTA TCTCCCCTAT ATTCAACCCG GTCTTGGTCT CGCTCGTTCG
GCCGCTGATG CATACAGGGT GAATCCTGAA ATTTGCGGTC TTGTTCTGCA AAAGCATGGT
CTTGTTACGT TTGGCGCCAG TGCCAAAGAG GCATATATTC GTATGATCGA GCATGTTACC
AGACTTGAGG ATTGTATCGC GAGAGCTGCA AGGAAAACGC GTATTCCGGT AACTCTTCCT
GAAGAGATTG CTCTGCCTGA GGATGTTGCT CCCGTTATCA GGGGGGCTGT GGTAGAGGAA
ACTGCGCCGG GTATACGTCA GTACCATCAG TTTATTCTTG ATTTCAGAAC ATCTCCGGCT
ATTCTTGATT ATGTCAATAG TCCCGATCTT TCGGCGATGA GCAGTAAAGG TGCTATGACT
CCGGATTTTA TCATTCGCAC AAAAAATCAG CCGCTTGTGC TTCAGGCTCC CGATGCACGG
GATATTGAGG GCTTCAAGCT CAGTGTTCAA GAAGCCGTAC AGCGCTATCA GGCGAATTAT
TCGGCTTATT TCGATCGCCA GAAAGCTGCC AGTGCAATGA ACGTATCCAT GCTTGATTCG
ATGCCAAGGG TCGTTCTCGT GCCTGGATTG GGTCTTTTCG GTCTTGGCAA GACAGCAAAA
GCGGCCAGGA TCAATGCTGA TATTGCCGCA AGTACCGCTG TGGCTATTCT TGACGCCGAG
TCAATCGGAG AGTTTGAGTC CATTTCTGAA TCCGAGGCAT TTGCCATCGA GTATTGGGAT
ATGGAGCAGT CCAAAGTTAA CAAGGTTCGT CACGATGTAT TCGCAGGTAA AGTTGTGCTT
GTTACCGGAG CTGCCAGCGG GATCGGGCTT GCTACGGCTA AGGCTTTCCG CCAGAAAGGC
GCTGAACTGG TTATTCTCGA TCTGAGTTAT GATGCGCTTG AAAAGGCCAG GGAGGCTCTT
GGAGAGAGTA CGCTTGCAAT AACTTGCGAT GTTACCAACC GTGCGGCGGT GAAAAGCGCA
TTTGATCTTG CCTGTCGTAC GTTTGGGGGT GTTGATATCA TGGTTTCCAA TGTCGGAGTC
GCTTTACAGG GGAGAATCGG CGAGGTTTCT GACGAACTGC TTCGAAAGAG TTTTGAACTT
AATTTTTTTT CGCATCAGTC CATTGCCCAG GAGGCGGTGA GAGTAATGAA ATTGCAGGGA
ACCGGCGGGG TTCTTCTTTT CAATGTATCC AAACAGGCCG TCAACCCGGG AGCTGATTTT
GGTCCTTATG GTCTTCCGAA AGCAGCGACG CTTTTTCTTG TTCGCCAGTA TGCGCTTGAC
CATGGACGCG ATGGTATTCG CTCAAACGGC GTGAATGCAG ACCGTATTCG AAGTGGTCTT
TTGACGGAGG AGATGATCAA GACCCGTTCA CAGGCTCGCG GTCTGAGTGA AAAGGAGTAT
ATGGCGGGAA ATCTGCTTCA GCTTGAAGTA ACAGCCGAGG ATGTTGCCGA TGCTTTCGTT
CATCTGGCGC TTGAAATCAG GACAACAGGG TCGATAACGA CAGTGGACGG TGGAAATATT
GCAGCCGCAC TTCGATAA
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| Protein sequence | MLNLWNDNDF QRFVQAQKNV NDTTSELAEL VYASRLLGRE SSLVMHGGGN TSVKNDLHDI
IGNTVNVIYI KGSGIDLADV EAYDFTAVRL EPLRKLQHLY ATGERRSDED IRRFSTSEFK
HFLYLNLFQL TDHIVSNSLS PSIETLLHAF LPHRYIFHTH SLALLTLSNQ ADGGARVRDE
FGDEFGYLPY IQPGLGLARS AADAYRVNPE ICGLVLQKHG LVTFGASAKE AYIRMIEHVT
RLEDCIARAA RKTRIPVTLP EEIALPEDVA PVIRGAVVEE TAPGIRQYHQ FILDFRTSPA
ILDYVNSPDL SAMSSKGAMT PDFIIRTKNQ PLVLQAPDAR DIEGFKLSVQ EAVQRYQANY
SAYFDRQKAA SAMNVSMLDS MPRVVLVPGL GLFGLGKTAK AARINADIAA STAVAILDAE
SIGEFESISE SEAFAIEYWD MEQSKVNKVR HDVFAGKVVL VTGAASGIGL ATAKAFRQKG
AELVILDLSY DALEKAREAL GESTLAITCD VTNRAAVKSA FDLACRTFGG VDIMVSNVGV
ALQGRIGEVS DELLRKSFEL NFFSHQSIAQ EAVRVMKLQG TGGVLLFNVS KQAVNPGADF
GPYGLPKAAT LFLVRQYALD HGRDGIRSNG VNADRIRSGL LTEEMIKTRS QARGLSEKEY
MAGNLLQLEV TAEDVADAFV HLALEIRTTG SITTVDGGNI AAALR
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