| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_2001 |
|---|
| Symbol | |
|---|
| ID | 4570829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | - |
|---|
| Start bp | 2315251 |
|---|
| End bp | 2316567 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 639766583 |
|---|
| Product | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit |
|---|
| Protein accession | YP_912438 |
|---|
| Protein GI | 119357794 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000765161 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTTATGT ACAACGAGGA TATAAAGGGT TTTTTTTCCT CTCGGGAAGA ACTGAATATG
CCGGATTATT TGACGCTGGA GTACTATCTG GAGTGCGTTG GCGACATTGA GACCGCTCTT
GCGCATTTCT GCAGTGAGCA ATCGACAGCC CAGTGGAAGC GGGTCGGCAT CGATGAGGAT
TTCCGTCCTC GTTATGCGGC AATGGTTATC GGTCTTGACG TTCTTGGCGA ATTACCGCAA
CTCAGTTATT CGGTACCGCA TTCTGAAACC GGAAAAATTC ATGCTTGCAG GGTTACCATT
GCGCATCCTC ATCGCAATTT TGGTCCGAAG CTTCCTAATC TCATTTCAGC GGTATGTGGT
GAGGGTGTTT ATTTTACTCC AGGGGTACCT GTCGTGAAAC TTCTCGATAT CGGGTTTCCC
CAGGAGTTCC TTTCCGCTTT TGACGGGCCT AAATTCGGTA TAGCCGGTAT TCGGGATCTT
CTGAAGGCTT ATAACCGTCC GATTTTTTTC GGAGTTGTCA AGCCCAATAT TGGTCTCAGC
CCCGAGCATT TCGGCGAAAT TGCTTTTCAG AGCTGGCTTG GCGGACTCGA TATAGCCAAA
GATGATGAAA TGCTTGCTGA TGTCGAGTGG TCAACCCTTG CGGATCGTTC TTGCGAACTT
GGCAAGGCCC GTATCCGAGC TGAAAAAGAG ACCGGCGAGC CTAAAGTTTA CCTTGCCAAT
ATAACCGATG AGGTTGATCA GCTTATCAAT CAGCATGACA TCGCTGTGAA AAATGGCGCC
AATGCATTGC TTATTAACGC TTTACCGGTT GGTTTGAGTG CGGTCAGAAT GCTTGCGAAG
CATACAAAGG TTCCGCTTAT CGGCCATTTT CCTTTTATCG CAGCCTTCAG CAGAATGGAG
AAGTTTGGTG TACATTCAAG GGTTATGACC AAATTGCAGC GGCTTGCCGG TCTTGATTCC
ATTATTATGC CGGGTTTTGG CAGCCGGATG ATGACGGCGG AAGAAGAGGT CAGGGATAAT
ATCCAGGAGT GTTTGCAGGA GTTTGGTCAT ATCAGGCCGT CTCTTCCTGT TCCGGGAGGA
AGCGATTCCG CCCTTACTCT TGAAGCTGTG TACCGCAAGG TCGGTAGTGT TGATTTCGGA
TTTGTGCCCG GACGCGGTGT TTTTGGTCAT CCTATGGGGC CGAAGGCAGG CGCCAGCAGT
ATTCGCCAGG CCTGGGATGC GATAGAAAAG GGTCTCTCTC TTGATGAATA TGCGATCGGG
CGACCTGAGC TGATGGCGAT GGTTGCTGTC GAAAATGCTA AAAAACAGCA CTCCTGA
|
|---|
| Protein sequence | MLMYNEDIKG FFSSREELNM PDYLTLEYYL ECVGDIETAL AHFCSEQSTA QWKRVGIDED
FRPRYAAMVI GLDVLGELPQ LSYSVPHSET GKIHACRVTI AHPHRNFGPK LPNLISAVCG
EGVYFTPGVP VVKLLDIGFP QEFLSAFDGP KFGIAGIRDL LKAYNRPIFF GVVKPNIGLS
PEHFGEIAFQ SWLGGLDIAK DDEMLADVEW STLADRSCEL GKARIRAEKE TGEPKVYLAN
ITDEVDQLIN QHDIAVKNGA NALLINALPV GLSAVRMLAK HTKVPLIGHF PFIAAFSRME
KFGVHSRVMT KLQRLAGLDS IIMPGFGSRM MTAEEEVRDN IQECLQEFGH IRPSLPVPGG
SDSALTLEAV YRKVGSVDFG FVPGRGVFGH PMGPKAGASS IRQAWDAIEK GLSLDEYAIG
RPELMAMVAV ENAKKQHS
|
|---|
| |