| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_2000 |
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| Symbol | |
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| ID | 4570828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | - |
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| Start bp | 2314410 |
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| End bp | 2315234 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639766582 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_912437 |
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| Protein GI | 119357793 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000578748 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAAAGC TCGATAACAA GGTTTCTGTT ATTACCGGAT CAACGCGTGG TATCGGAAAG
GCTATAGCCC AGGCATTTGT CTCGGAAGGA TCGAAAGTAG TCATTACCTC CTCTTCGCAA
GCGAATGTCG ACGCAACTGT ATCGGAATTT CCACCAGGCT CGGTGTATGG ACATGTTTGT
GATGTTGCCT CTTTTCGGGA AATGGAGCGG CTTGTCGATG CCTCGGTTGG CAAATTTGGC
CGGATTGACT GTTTTATCAA TAATGCGGGC ATTTCGGAGC CGTTCTGTAA TATTACCGGT
GGCGATCCGG ATATCTGGGG GAGGGTTATT GATACCAATC TCAAAGGTAC CTACTACGGT
TGCCGGGCAG CCATCGGTTA TTTCCAGAGA GAAGATATTC CGGGCAAGAT TATCACGATG
GCGGGTTCAG GAACCGATAA GGGATCGAAT ACCCCGTATA TCAGTGCATA TGGATCCACC
AAGGCTGCTA TTGCCCGATT TACCTCGGCG ATTGCTGAAG AGTATCGGCA TACCGGTATT
TCGATCATGC TGCTTCATCC CGGTCTCGTT CGGACGGGCA TGGTCAGTGC AGAACAGCCT
ACCCCTGAAC TGCTTCGGCA GCTTTCCGTT TTCAACACTA TTCTCGATAT TTTTGCGCAG
CCTCCATCGG TAGCCGCCGA TCTTGCCGTA AAAATGGCTT CCGGCTGGAG CGACGGAAAA
ACAGCTCTTT ATCTTTCTGC TCTTACCGGC TGGAGAAAAA AAAGGTTGTT GCTGACCTAT
CCCTTCCGTA AACTGTTCAA CAGTATCGAT CGTCGAACCT ACTAA
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| Protein sequence | MGKLDNKVSV ITGSTRGIGK AIAQAFVSEG SKVVITSSSQ ANVDATVSEF PPGSVYGHVC
DVASFREMER LVDASVGKFG RIDCFINNAG ISEPFCNITG GDPDIWGRVI DTNLKGTYYG
CRAAIGYFQR EDIPGKIITM AGSGTDKGSN TPYISAYGST KAAIARFTSA IAEEYRHTGI
SIMLLHPGLV RTGMVSAEQP TPELLRQLSV FNTILDIFAQ PPSVAADLAV KMASGWSDGK
TALYLSALTG WRKKRLLLTY PFRKLFNSID RRTY
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