Gene Cpha266_1981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1981 
Symbol 
ID4570421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp2295039 
End bp2295893 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content52% 
IMG OID639766562 
Productendonuclease IV 
Protein accessionYP_912418 
Protein GI119357774 
COG category[L] Replication, recombination and repair 
COG ID[COG0648] Endonuclease IV 
TIGRFAM ID[TIGR00587] apurinic endonuclease (APN1) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGTG TCGGAGCACA TGTCAGTATT GCGGGAGGCA TCGAAAATGC TCCGCTGAAC 
GCCAGCAGCA TTGGCGCAAC AGCATTCGCA TGCTTTACAA AAAATCAGCG GCAGTGGAAA
TCTCCTGAAA TCTCCCCGGC GTCAATAGAG CTATTCGAAA AAAACTGCGC TACTGCCGGG
ATCAGGTCTG AACACATCCT CCCGCACGAC AGCTACCTCA TCAACCTCGG CAACCCCGAT
CCCGACAAAC TGGAGCGATC AAGAAATGCG TTTATTGATG AAATTCGTCG GGCGGCAAGT
CTCGGCCTCG TCATGCTGAA CTTCCATCCG GGAAGCCACC TCAATCAGAT TGATGAAAAG
GGCTGTTTGC AGCTTATTGC CGATTCTGTT AACATCGCTC TCGAAAAAAC CTCCGGCGTC
ACAGCCGTCA TCGAAAACAC CGCCGGACAG GGAAGCAACC TCGGCAACAG CTTTGAACAA
CTTGCCTCGA TCATTGATAA AATCGACGAT AAATCCAGAG TCGGGGTTTG TCTTGACACC
TGCCATCTTT TTGCGAGCGG CTACGACCTG CAATCAAGCG AAGCCGTAAC GGCAATGTTC
GAAGCATTTG ACCGGACTGT CGGGCTCTCC AACCTGAGAG GAATGCACCT CAACGATGCG
AAACACCCGC TCGGAAGCCA TCTTGACCGA CATGCCTGTA TCGGAAAAGG AGCGATCGGG
CTCAGCGCCT TCGCATCTAT CATGAACAGC CCATTCTGCG AGGAGATCCC CCTCATCCTT
GAAACACCGG ATGCGGAGGG TTGGAAAGAG GAGATAGTTC TTCTCTATTC ACTCATAGAC
CATCCGATCA AATAG
 
Protein sequence
MKRVGAHVSI AGGIENAPLN ASSIGATAFA CFTKNQRQWK SPEISPASIE LFEKNCATAG 
IRSEHILPHD SYLINLGNPD PDKLERSRNA FIDEIRRAAS LGLVMLNFHP GSHLNQIDEK
GCLQLIADSV NIALEKTSGV TAVIENTAGQ GSNLGNSFEQ LASIIDKIDD KSRVGVCLDT
CHLFASGYDL QSSEAVTAMF EAFDRTVGLS NLRGMHLNDA KHPLGSHLDR HACIGKGAIG
LSAFASIMNS PFCEEIPLIL ETPDAEGWKE EIVLLYSLID HPIK