| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1922 |
|---|
| Symbol | |
|---|
| ID | 4569866 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | - |
|---|
| Start bp | 2229660 |
|---|
| End bp | 2230349 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639766504 |
|---|
| Product | MIP family channel protein |
|---|
| Protein accession | YP_912362 |
|---|
| Protein GI | 119357718 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
|---|
| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.748219 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT ATGTTGCGGA ATTTGTCGGC ACATTTTGGC TGGTTCTTGG CGGATGTGGA
AGCGCAGTGC TTGCGGCTGC TTTTCCTGAT GTCGGGATCG GTCTGCTTGG AGTTTCTCTC
GCCTTTGGGT TGACTGTTCT GACCATGGCA TATGCTATAG GACATATCTC CGGTTGTCAT
CTTAATCCTG CTGTTTCCGT TGGACTTTGG GCAGGCGGCC GTTTTCCGGC AAAAGAGTTA
CTGCCCTATA TTTTCGCCCA GGTTGCTGGC GGCATTGCGG CAGGCGGCGT TCTTTTTCTG
ATCGCCAGCG GTAAAGCGGG GTTTGATGTC CATGCGGGTT TTGCGTCAAA CGGCTACGCC
GAACACTCGC CCGGCGGATA TTCGCTTATT TCAGCGCTTG TTACCGAAGT GGTTATGACC
ATGATGTTTC TGCTTGTCAT TCTCGGCTCA ACGGATGGTC GGGCTCCGAA GGGAATGGCT
CCGATTGCTA TCGGTCTTTG TCTTACCCTG ATTCATCTTA TCAGCATTCC CGTAACCAAT
ACCTCAGTTA ATCCTGCCCG CAGTACAGGC GTTGCCGTTT TTGTCGGGGG ATGGGCACTA
TCGCAGCTCT GGCTATTCTG GATTGCTCCG ATTGCGGGAG CGCTGGCAGG CGCAGTGATA
TACCGGTTTA TTGGCGGAAG CGAAGAGTGA
|
|---|
| Protein sequence | MKKYVAEFVG TFWLVLGGCG SAVLAAAFPD VGIGLLGVSL AFGLTVLTMA YAIGHISGCH
LNPAVSVGLW AGGRFPAKEL LPYIFAQVAG GIAAGGVLFL IASGKAGFDV HAGFASNGYA
EHSPGGYSLI SALVTEVVMT MMFLLVILGS TDGRAPKGMA PIAIGLCLTL IHLISIPVTN
TSVNPARSTG VAVFVGGWAL SQLWLFWIAP IAGALAGAVI YRFIGGSEE
|
|---|
| |