Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_1908 |
Symbol | |
ID | 4570867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 2215585 |
End bp | 2216322 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639766490 |
Product | Type II site-specific deoxyribonuclease |
Protein accession | YP_912348 |
Protein GI | 119357704 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000191766 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCTTG ATCTTGTCAA TTACGAACAA AAGGCACATG AAGCCGTAAA ATCCTTCTGG AGTAATCGTG AGGTGGCGAA GCAAAAGCAG CTCCTGACAG GCAAGGCTGA CCACGGTGAG CGTGCTGGTG TTACCGCAGG CAAGAATATG GACGGATTTC TCGCTTTGGT TCTCGATATC ATACAGGCAA ATGGACTCGC CCATGCCGAG ATACATCAGA ATCGGTCGAT GCTGACATTG CCCGGCTATT TCAGACCGAC AAAGCTTTGG GATCTTCTTG TGATCTACAA GGGAGAATTG ATCGCTGCTA TCGAATTAAA AAGCCAGGTG GGCTCCTTTG GTAATAATTT TAACAATCGA ACTGAAGAAG CCATTGGTAC CGCGTATGAT CTATGGACGG CCTATCGTGA AGAGGCATTC GGCAAACAAC CGCGTCCTTT TGTTGGCTGG CTGATGATGG TTGAGGATGC TCCGAAATCC CGATGTGCTG TCAGGGATGC TTCACCTCAT TTTCCTGTTT TCGGGGAGTT TGAAGGGGCT TCTTACCTTA TGCGGTATGA CTTGCTCTGT CAGAAATTGG TGAAGGAACA ACTGTATACT ACGGCTGCTC TGATCACTTC GACTCGCTGT GCTGCAGAAA CCGGTGAGTT TTCAGAAATG TCGTCGATGA CTGGCTTCAG GCCATTTGTT ACTGCACTGG CTGGTCACGT TGCTGCAGCA GCAGCCAGAC TTGATTGA
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Protein sequence | MTLDLVNYEQ KAHEAVKSFW SNREVAKQKQ LLTGKADHGE RAGVTAGKNM DGFLALVLDI IQANGLAHAE IHQNRSMLTL PGYFRPTKLW DLLVIYKGEL IAAIELKSQV GSFGNNFNNR TEEAIGTAYD LWTAYREEAF GKQPRPFVGW LMMVEDAPKS RCAVRDASPH FPVFGEFEGA SYLMRYDLLC QKLVKEQLYT TAALITSTRC AAETGEFSEM SSMTGFRPFV TALAGHVAAA AARLD
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