Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_1900 |
Symbol | |
ID | 4570859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | + |
Start bp | 2206741 |
End bp | 2207673 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639766482 |
Product | malate dehydrogenase |
Protein accession | YP_912340 |
Protein GI | 119357696 |
COG category | [C] Energy production and conversion |
COG ID | [COG0039] Malate/lactate dehydrogenases |
TIGRFAM ID | [TIGR01763] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAT CCGTTATTGG AGCTGGTAAT GTCGGGGCTA CTGCTGCGCA TCGCCTTGCA GAAAAACAGC TCGCACATGA AGTTGTCCTG ATTGATATTG TAGAGGGCAT TCCGCAGGGA AAAGCGCTTG ACATGTACGA ATCCGGTCCG GTAGGACTTT TTGATACCGC TATCCATGGA TCAAACGATT ATATGGCATC CGCTGATTCG GATATCGTCC TGATTACCGC CGGGCTTGCA AGAAAACCGG GCATGACCAG AGAAGATCTG CTCATGAAAA ATGCGGGAAT CGTCAAAGAG GTTACCGACC AGGTAATGAA ACACTCATCG AATCCGATTC TTGTGATGGT ATCCAACCCA CTCGATGTCA TGACCTTTGT TGCTCATGCG TCAAGCGGTC TTGGTAAAGA ACGGGTGATC GGCATGGCTG GCGTTCTCGA TGCTGCAAGG TTCAGAAGCT TCATTGCAGA AGAACTGAAC GTTTCGATGC AGGACGTCAA TGCCTTTGTC CTGGGGGGAC ATGGTGACTC CATGGTACCT GTGGTTAAAT ATACATCGGT TGCAGGCATA CCGATCACCG AGCTGCTCTC GCAGGAAAAA ATTGACGCGC TTGTCGAACG TACTCGCAAC GGCGGTGTTG AAATCGTCAA CTATCTCAAA AACGGTTCGG CATTCTATGC CCCCGCAGCT TCCGCTGTGG AGATGATAGA GGCTATCGTC AAAGACCGCA AACGGATACT TGCCTGTACA ACCCTGCTTG AAGGAGAGTA CGGCATCAAT AACGTTTTTT GCGGCGTTCC GGTAAAGATA GGCAAAAACG GTGTTGAAGA GATTCTCGAA ATCAATCTTG CGCCGGCTGA ACTCGACGCA CTGAAGCATT CCGCCAGCCT CGTGCAGGAA AACTGCAAAA GCCTTGAAGC GCTTCTCGCC TGA
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Protein sequence | MKISVIGAGN VGATAAHRLA EKQLAHEVVL IDIVEGIPQG KALDMYESGP VGLFDTAIHG SNDYMASADS DIVLITAGLA RKPGMTREDL LMKNAGIVKE VTDQVMKHSS NPILVMVSNP LDVMTFVAHA SSGLGKERVI GMAGVLDAAR FRSFIAEELN VSMQDVNAFV LGGHGDSMVP VVKYTSVAGI PITELLSQEK IDALVERTRN GGVEIVNYLK NGSAFYAPAA SAVEMIEAIV KDRKRILACT TLLEGEYGIN NVFCGVPVKI GKNGVEEILE INLAPAELDA LKHSASLVQE NCKSLEALLA
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