Gene Cpha266_1866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1866 
Symbol 
ID4571208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp2162435 
End bp2163130 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content53% 
IMG OID639766448 
ProductABC transporter related 
Protein accessionYP_912306 
Protein GI119357662 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACTCG AGGTAAAAAA AATCTGCAAA TCATACGCAC TCCCCTCCAG AGACGCCATT 
CCGATTCTCA GAGGAATTGA TATGGTCGTC GGCGAAGGCG AACTGGTCAC GGTCATCGGG
GCGTCGGGAA GCGGCAAAAC AACCCTTCTG AACCTGCTCG GCACCCTCGA TACCCCCGAC
AGCGGCGAAA TTTTCTTTGA TGGAACCACG CTCTTCAGCA AGGGGGCGTA CACGCTGTCG
AAAAAAGAAC TGGCACGCTT CAGAAACAGT AAAATAGGCT TTGTCTTTCA GTTTCATCAT
CTGCTTTCCG ACTTCAGCGC CGTTGAAAAT GTAGCCATGC CTGCATTTAT CTCCACCGGC
AAACTTCCTC CGGCAAAAAA AAGGGCCGAG GAGCTGCTCG TCGGACTCGG GCTTAAAGAT
CGCCTCCATC ACCTTCCTTC AGAACTGTCC GGGGGCGAAC AGCAGCGGGT AGCCATAGCA
CGGGCCCTCA TGAACAATCC GAAACTGGTG CTTGCCGACG AACCAAGCGG CAACCTCGAC
AGCAAAAACA GCCGGATGCT CTACGAACTG ATGGCGAATC TTGGCAAAGA ACGAAAAACT
TCGTTTGTTA TTGTCACCCA TAACGAGGAA TACGCCGCGC TTGCAGACCG TTGCCTCCAC
ATGCAGGACG GCATGCTGAA TGTCTGCGAA AAGTGA
 
Protein sequence
MILEVKKICK SYALPSRDAI PILRGIDMVV GEGELVTVIG ASGSGKTTLL NLLGTLDTPD 
SGEIFFDGTT LFSKGAYTLS KKELARFRNS KIGFVFQFHH LLSDFSAVEN VAMPAFISTG
KLPPAKKRAE ELLVGLGLKD RLHHLPSELS GGEQQRVAIA RALMNNPKLV LADEPSGNLD
SKNSRMLYEL MANLGKERKT SFVIVTHNEE YAALADRCLH MQDGMLNVCE K