Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_1861 |
Symbol | |
ID | 4571203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 2156396 |
End bp | 2156962 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639766443 |
Product | peptide deformylase |
Protein accession | YP_912301 |
Protein GI | 119357657 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATTGC CGATCAACAT CTATAACGAT GAGGTACTGA GGGCAACCGC AAAACCCTTG AAGGGCATTG ATCGCAACAT CCGGGATCTT GTTGCGAGCA TGCTTGAGTC CATGCGCAAC GCATCGGGAA TAGGACTTGC CGCACCGCAG GTCGGTTGCT CGATCCGGTT GCTGGTGATT GATCTGTCCT GTATGGAGAA ATATGCAGAT GAAAAGCCGG TGGTTGTGAT CAATCCGCAC CTGCTTGCCG TCAAGGGTTA CAATGCGATG GAAGAGGGGT GTCTCAGTCT GCCTGGCATT CTTGGCGACG TTGTTCGTCC ATCCTCGATC ACCCTGAAAT ACCGCGATGA ACATTTCGAG GAACGAACCG GTGAGTTTTC GGGAATGATG GCGCGGGTAC TCCAGCACGA GATAGATCAT CTCGATGGCA AGCTGTTTAT TGACAGGATG CAGAAACGTG ACCGGAGAAA AATAGACAAA GAGCTTCACT CCCTTGCAAT CGGCAATGTT GAGGCGGATT ATCCTCTGGC ACTGGCAGGT ATTGCTCAAA AGGCCTGTGA GGCTTGA
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Protein sequence | MILPINIYND EVLRATAKPL KGIDRNIRDL VASMLESMRN ASGIGLAAPQ VGCSIRLLVI DLSCMEKYAD EKPVVVINPH LLAVKGYNAM EEGCLSLPGI LGDVVRPSSI TLKYRDEHFE ERTGEFSGMM ARVLQHEIDH LDGKLFIDRM QKRDRRKIDK ELHSLAIGNV EADYPLALAG IAQKACEA
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