| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1842 |
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| Symbol | |
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| ID | 4571184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | - |
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| Start bp | 2119392 |
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| End bp | 2120384 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639766424 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_912282 |
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| Protein GI | 119357638 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0372122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAAAA AATCGTTTAC CGATGACCTG ATTGGTCAGG GAGAGGTGTT TACCCAGTCG
CTTGCCGTAC CGAGGGCGAT TCTCTGGGTT CTTGTGCTCT CTTTTTTCGG CTTTATTGTC
TGGTCGGCTA TTGCCAAAAT CGATGTTTCC ATTCCGGCCA TGGGAAAACT TGAGCCTACC
GGCGAGGTAA AAAGTATTCA GGCTGCTATT GAGGGTGAGG TCAGATCCCT TTTTGTGGAG
GATGGTCATC GGGTCAAAAA GGGCGATGTC CTTCTTGAAC TTGTTCCAGT GCTCTCTGTC
GGGGAGGAAT CGAAGCTGAA GTCGCTGCAG ATCGGCCTGT CAAATGCCAG GCAGCAGTAT
GCAACCGAGT CGGCAATGCT TGCAAAGTTG CGCTCTCTTT TGAACAGTGC CGCTGTTTCG
GAGTTTGAGG TGGAGCAGAA AAAGCTTGAC GTGCTTAAAC TGCAGGCGCA GATTGCCGAT
CTTGCCGAGC AGATCAACAA GCAGAGTTAT ATGGCCAATC AGGCCACCGG CTATGAGTCG
ATTACCGCGC CGGTTAACGG AACGGTTTTT GATCTTCAGG TGAAAAAGGG TACGGTGGTC
AGTTCAGGCC AGGTTATTCT GAAGGTTGTT CCCGATGACA ATCTTACGGC GAGAGCCTAT
ATTTCGAATC AGGATATCGG TTTTGTGTTT GAAAACCTTC CGGTTGATGT GAAACTTGAC
GCTTTTCCCT ATGCGGAGTT CGGCGATATC AAGGGCGTGG TGACCTGGGT TGGTTCCGAC
GTTCTTGCTC CTGATGATAT TATCAAGTAC TATCATTTCC CCATCAAGGT GAGGCTTGAC
AAACAGTATC TCGATGCCCA GGGGAAGAAA ATCTATCTGC AGTCGGGCAT GTCGGTTACC
ATGAATATCA AGGTCAGAAA GCGTACGGTC ATGAGTATTT TTACCGATCT CTTCTCCAAA
CAGGGCGATG CTATCAGCCA TATCAGGAAG TAG
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| Protein sequence | MKKKSFTDDL IGQGEVFTQS LAVPRAILWV LVLSFFGFIV WSAIAKIDVS IPAMGKLEPT
GEVKSIQAAI EGEVRSLFVE DGHRVKKGDV LLELVPVLSV GEESKLKSLQ IGLSNARQQY
ATESAMLAKL RSLLNSAAVS EFEVEQKKLD VLKLQAQIAD LAEQINKQSY MANQATGYES
ITAPVNGTVF DLQVKKGTVV SSGQVILKVV PDDNLTARAY ISNQDIGFVF ENLPVDVKLD
AFPYAEFGDI KGVVTWVGSD VLAPDDIIKY YHFPIKVRLD KQYLDAQGKK IYLQSGMSVT
MNIKVRKRTV MSIFTDLFSK QGDAISHIRK
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