Gene Cpha266_1827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1827 
Symbol 
ID4571169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp2084205 
End bp2084552 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content42% 
IMG OID639766409 
Productanti-sigma-factor antagonist 
Protein accessionYP_912267 
Protein GI119357623 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATTA TTGAGAAAAT TTGTCACAAT ATTACCGTCG TCGCTTTGCA GGGCACTCTG 
GATTCATCTT CATCTGTGCA GTTGCATAAT TATACATCTC CATCCGTGAC GGAGGATCCG
CTTGTTATCG ATCTTACGAA TCTTAATTTT CTCGACAGCA GTGGTCTTGG CGCACTGGTG
GAGATTGCCC GGAAAAAAAG GGAAAAAGGC AGCGATGTCA AGCTGGCCTG TATGAATGAG
AAAGTCAGAA AGGTGTTTGA AATAACGCAG GCATACCGGT TATTTGATAT TTATGATGAT
GTCGAAGCCG CATCTGTGAA TGCCGGAAAA AAAAAGAATA GCTTATGA
 
Protein sequence
MIIIEKICHN ITVVALQGTL DSSSSVQLHN YTSPSVTEDP LVIDLTNLNF LDSSGLGALV 
EIARKKREKG SDVKLACMNE KVRKVFEITQ AYRLFDIYDD VEAASVNAGK KKNSL