Gene Cpha266_1793 details

Gene Information

• Locus tag: Cpha266_1793
• ID: 4571155
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium phaeobacteroides DSM 266
• Kingdom: Bacteria
• Replicon accession: NC_008639
• Strand: -
• Start bp: 2044920
• End bp: 2046746
• Gene Length: 1827 bp
• Protein Length: 608 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 639766376
• Product: GTP-binding protein TypA
• Protein accession: YP_912234
• Protein GI: 119357590
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00485] translation elongation factor TU; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.520396
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAGGA AAAAAGATAT CAGGAATATA GCCATTATTG CACATGTTGA TCATGGAAAA 
ACAACGCTTG TTGATGCTAT TTTTCAGAAT ACCGGAGCTT TTCGTGATAA CCAGCAGGTA 
AATGTTCGTG TGCTTGACTC CAACCCGCAG GAGCGGGAGC GCGGCATTAC CATTTTTTCA 
AAGAATGCGG CAGCACGTTA TAAAGATCAC AAAATTAATA TTGTCGATAC TCCAGGTCAT 
GCTGATTTTG GCGGTGAAGT TGAGCGCATC CTGAAAATGG TTGACGGGGT TCTTCTGCTT 
GTCGATGCGT TTGAAGGGCC AATGCCTCAG ACGAAGTTTG TGCTTCGCAA GGCGCTTGAA 
CTTCATTTGA AGCCCATTGT TGTCATCAAC AAGATCGACC GACCGCAGTC AGACCCGGTG 
AAGGTTCATG ATCAGGTGCT TGATCTCTTT ATTGCTCTTG GCGCGGAAGA GGATCAGCTT 
GACTTTGCCT ATCTCTTTAC CTCCGCAAAA CTTGGTATTG CAAAATACAG TATGGATGAT 
GAGGATCATG ACATGAGTCT TTTGCTCGAT ATGATCATCA AAGAGATTCC CGCTCCCATA 
GGCAATGATG ATGCAGGATT TCAGATGCTG ATCACCAGCC TTGACTACAG CGAGTATATC 
GGCAAGATAG CGATCGGTCG TATTCACCGG GGCACGATAA GCCCGGGAAA TCAGGTTGCC 
GTTGTCGGTC CTGACGGGGT GGTGGGAAAA GGAACCGTTA CCAAAGTTTT CCAGTTTGAC 
AAACTTCAGA AAGTCGAGGC AAAAGAGGCC TCATCAGGAG ATATTATTGC GATTGCGGGT 
ATAGCCGATG CTACAGTCGG TATGACTCTC GCAGCTCTTG ATACTCCCGA ACTGCTTGAG 
TCGTTTGAGA TCAGCAAGCC GACTCTTTCC ATGCTTTTTT CCGTGAACGA CTCTCCCTTC 
GCAGGGCTTG AGGGAAAAGA GGTTACAAGC CGCAAGATTC GCGAACGGTT GATGAAAGAG 
GTGATGACCA ATGTCGCCCT TAACGTTGAA GAGACCGATA GCGCCGATAC CTTCCGCGTA 
TCAGGAAGGG GAGAGCTTCA TCTTTCAGTG CTGATTGAAA CCATGAGGCG CGAAGGGTAT 
GAGCTTGCCA TTGCAAGACC GGAGGTGATC ATGCACAATG ATGAGAGCGG AACGCTGCTT 
GAGCCGATTG AACATGTTAC GATTGATATT CCGGACGAAT ATACCGGCGT GATCATTGAG 
AAAATGGGTC GCAGAAAGGC TGAGATGACG CATATGGGCA CTCTTCGAGG CGGTATGGTC 
AGACTGGAAT TTGAAATTCC GACAAGAGGC CTGATCGGTT ATAATCTTGA GTTTACCACA 
GATACCAAGG GCGAGGGGAT ACTCTCACAT GTTTTTTATA ACTACCAGCC ATTCAAGGGC 
AAGTTGCCTT CGCGTGAAAG CGGTGCGCTT GTCGTCTCTG AAGCCGGAAT ATGCGTTGCC 
TACGCACTCA GCAGTCTTGA AGATCGCGGT ACCTTTTTTG TTTCGCCCAA TACCAGGGTC 
TATGAGGGTA TGATTGTCGG CGAATCGACA AGAGGTCTTG ATATTACCCT GAATGTCTGC 
AAGACGAAAA AACTCAGCAA CATGCGCTCT TCCGGCACGG ATGATTCGCT TCGTCTGACA 
CCACCGAAAA TATTGTCGCT GGAACAGGCT CTTGAATTTA TCAATGATGA TGAGTTGCTC 
GAAGTGACTC CGCAAAGCAT CAGGTTGAGA AAAAAGATTC TCGATGCTAA CCTGAGGGCA 
AAGGCCACCA AAAAAGCTAA TGCTTAG 

 

Protein sequence

MSRKKDIRNI AIIAHVDHGK TTLVDAIFQN TGAFRDNQQV NVRVLDSNPQ ERERGITIFS 
KNAAARYKDH KINIVDTPGH ADFGGEVERI LKMVDGVLLL VDAFEGPMPQ TKFVLRKALE 
LHLKPIVVIN KIDRPQSDPV KVHDQVLDLF IALGAEEDQL DFAYLFTSAK LGIAKYSMDD 
EDHDMSLLLD MIIKEIPAPI GNDDAGFQML ITSLDYSEYI GKIAIGRIHR GTISPGNQVA 
VVGPDGVVGK GTVTKVFQFD KLQKVEAKEA SSGDIIAIAG IADATVGMTL AALDTPELLE 
SFEISKPTLS MLFSVNDSPF AGLEGKEVTS RKIRERLMKE VMTNVALNVE ETDSADTFRV 
SGRGELHLSV LIETMRREGY ELAIARPEVI MHNDESGTLL EPIEHVTIDI PDEYTGVIIE 
KMGRRKAEMT HMGTLRGGMV RLEFEIPTRG LIGYNLEFTT DTKGEGILSH VFYNYQPFKG 
KLPSRESGAL VVSEAGICVA YALSSLEDRG TFFVSPNTRV YEGMIVGEST RGLDITLNVC 
KTKKLSNMRS SGTDDSLRLT PPKILSLEQA LEFINDDELL EVTPQSIRLR KKILDANLRA 
KATKKANA