Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_1748 |
Symbol | |
ID | 4571110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 1975105 |
End bp | 1976820 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639766331 |
Product | type I secretion system ATPase |
Protein accession | YP_912189 |
Protein GI | 119357545 |
COG category | [R] General function prediction only |
COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.492562 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCCTC AATTTTTTAA GCGTAGCGCA CTCACCCGAC AGATCGGGGG ATTTCGAAAA GAATTTCTCT GGGTCGGCAT GTTCAGCATG ATCGCCAATG TATTGATGCT TGCCCCAACC ATCTATATGC TGCAGCTCTA TGGTCGTGTC ATGAAAAGTG GCAGCGAGAT GACCCTGTTT CTGGTAACCC TCTTTCTGTT GCTTTTTTTT GCAGTGACGG CATGTGCTGA ATGGCTTCGT TCGCGTCTGC TGGTGCGAGT AGGAGTCAGA CTTGATGAAG CGCTCAGCTC GCTGGTTTTT AATGCGAGCT TTGAAGATTG CCTGAGCCGA TCCCGTCATA AAGCAGACGA GGCATTTCAG GATTTAACCA CGCTTCGCCA GTTCATGACG GCAAATGGTA TTATTGCCTT TTTTGATACC CCCTGGACGC CGGTATACAT AGCGGTTATT TTTCTGCTCA GCCCTTTTCT CGGATGGATC TCTGTCGTGT TTGCCCTCAT TCAGCTTGCT GTAACCTGGC AGAGCAACAG GATAAGTGTT CGGGAGATCG AAAGTGCTGC TGAGGCTGGC GCCGGGAGTT ATCGCTACGT ACAAAGCAAG CTTCGCATGA TCGAGCCACT TTATGCAATG GGGATGCAGG GAAACCTCAG AAGACGTTGG CTCAGGCTGC ACGATGCCTC GCTTCTCAAA AGCAGCGTTG CGCTTGACCG GCAGCATCGC CAGCAGGCAT TAGCCAAGTT TGTGCGATAC AGCATGCAGT CGCTGACACT CGGAGCTGGA GCCTTTCTGG TCATTGAAGG AAAACTGTCG GCAGGCTCGA TGATAGCGGC TAATGTTTTG ATGTCGAGGG CTCTCCAGCC GCTCGATCTT GTGGTTGCAA CATGGAAGCC TTTTGTTCAG GCTCGCGTTG CATTTTTACG TATTGAGAGA CTACTTGAAA AATTTTCCGA TTCCGGGCTT CGTTCAGAGC ACGATCAGGA GCCTTTGGGA GAAATCAGGC TTAATGGGCT TACCGCCAGG GTAGCGGGTC GAACGAAGCC TGTTCTGAAC GACCTTCATG CGCTCTTTCC TGCCGGAAAA ATTACCGTGA TTCTCGGGCC GTCAGGCTCA GGAAAATCTA CGCTTGCCCG CTGTGTTTTG GGCGTCTGGC CAGATAAGGA GGGCGATGTG CTGCTTGACG GCGATCCGAT AGAGAGCTGG GAGCGGAAAG AGCTGGGGCC GCATGTCGGT TATCTGCCGC AGGATATTGA GTTGTTCGAT GGATCAATTG CTGAAAACAT TGCCCGATTT GGCGAGCTGG ATTCTCCGAA AATCATTGAG GCTGCAACAC GAACGGGTAT TCATGAGATG ATTCTTCGTT TTCCGCATGG TTACGACACC CGGATCGGTG AGGACGGAGG ATTGCTTTCT GCGGGGCAAC GACAGCGGCT TGGACTTGCG AGGGCAATGT ACGGCAATCC GAAGATTCTT GTGCTCGATG AACCCAATGC CAATCTTGAT GACGCAGGAG AACGGGCACT CTTGCAGGCA CTCAGGGAGT TACGGGCAGC AGGTAAAACG GTGATTCTTA TCACCCATCG TCCAGGTGTG ATTGCCGTCG CCGACCTGTT GGCCCTCATG CAGGCAGGAA AGATCGTGCA GTGCGGACCA AGAGATGAGG TTATTGCATC ATTGCGCAAT GAAAGCACAA AAGCGTCGGT AGTGCCGGCA GAATGA
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Protein sequence | MNPQFFKRSA LTRQIGGFRK EFLWVGMFSM IANVLMLAPT IYMLQLYGRV MKSGSEMTLF LVTLFLLLFF AVTACAEWLR SRLLVRVGVR LDEALSSLVF NASFEDCLSR SRHKADEAFQ DLTTLRQFMT ANGIIAFFDT PWTPVYIAVI FLLSPFLGWI SVVFALIQLA VTWQSNRISV REIESAAEAG AGSYRYVQSK LRMIEPLYAM GMQGNLRRRW LRLHDASLLK SSVALDRQHR QQALAKFVRY SMQSLTLGAG AFLVIEGKLS AGSMIAANVL MSRALQPLDL VVATWKPFVQ ARVAFLRIER LLEKFSDSGL RSEHDQEPLG EIRLNGLTAR VAGRTKPVLN DLHALFPAGK ITVILGPSGS GKSTLARCVL GVWPDKEGDV LLDGDPIESW ERKELGPHVG YLPQDIELFD GSIAENIARF GELDSPKIIE AATRTGIHEM ILRFPHGYDT RIGEDGGLLS AGQRQRLGLA RAMYGNPKIL VLDEPNANLD DAGERALLQA LRELRAAGKT VILITHRPGV IAVADLLALM QAGKIVQCGP RDEVIASLRN ESTKASVVPA E
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