Gene Cpha266_1684 details

Gene Information

• Locus tag: Cpha266_1684
• ID: 4569896
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium phaeobacteroides DSM 266
• Kingdom: Bacteria
• Replicon accession: NC_008639
• Strand: +
• Start bp: 1911891
• End bp: 1913780
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 639766270
• Product: ABC transporter related
• Protein accession: YP_912129
• Protein GI: 119357485
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component; [COG4177] ABC-type branched-chain amino acid transport system, permease component

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0459583
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTTTTTCA CTATTGTATC AGGGCTGAAA GAAAAAACCG CTGAACGGAT TATACGAATA 
CTCCTGTTTA CCGGACTTGC TCTCTTTCCC TCCATCTGGC AGGGAAAATT TGCACTTGGC 
CTTTTGACCC TTATGGCTGT TTATGGCATA CTGCTTATCG GCCTTGATGC AACCGTTGGC 
TATCTTGGAC AGGTAAATCT GGCACAGGCA GCCCTGTTCG GGCTCGGCGC CTATGGAGCA 
GCCCTTGCTG TTCAGGCAGA TGCGGCTTTT CCGGTTGTAC TGCTTGCAGG AATTACAGCA 
GCCCTTCTTC CCGGTGTAGC CCTGGCGCTC CCGACACTGC GACTGGAAGG ACCACAGTTC 
GCATTGTCCA CACTCTCCTT TGCCACATTA TCGGTTATTG TGCTCAACGA GGCAGAATCA 
ATCACCAACG GTGCCCTCGG CCTCTCCATT ACAAGACCAG CGCTGTTCGG ATTCTCTCTT 
GACGCAACCG GTTTTTACTG GTTATGCCTG ATCATCCTCG CCATAACATG GTCGGCATCG 
CAAAGCCTGT TGAAATCCCG GTTCGGACTT GCTATTGAAG CCTTGCGCGA CTCCCCGATA 
GCAACTGATG CCCTCGGCAT AGGAACACTG CGCCACAAAG CGCTTGCGTT TGCCTGGGGA 
AGCGCCCTGG CCGGTCTTGC CGGAGCGCTG CATGCGTTGA ATTTCGGCTA TCTGCAACCG 
GCAGCATTCG GCTATGACCT GATGGTTATT CTGCTTCTCG GTGTTGTTTT TGGCGGTCGG 
AGAAGCCAAT GGGGCTCTTT CACCGGAGCT CTGGTTATTG CCATGCTTCC CAACCTGCTT 
TCGAACCGGA CTTTTTTTTC ATCCCTTGCC GCAGCAGGCT TTGTCATTGC ACTCATTCCT 
GTCATCCGTA CACTTCTCTC GAAAAAAATT CCGTCCTTTA CGGCAATAGC TCCTGCTCTG 
GCCATGATGA TATCATCAGG ACTGGCTTTT TTTGCCCCTA ATGTTGAAGA CTGGCGAAAA 
GGAATCTTTG CCCTTTTTCT GTTTGCCACT GTTGTCGGCC TGCCTGACGG ACTTGCCGTT 
GCTCTTGCCA AAACACTCCG AAAGCTGATA CGGTTTTCTC CCGATCCGCT GCCGCAAGCT 
ATGGGAGGAC TCAGGCCACT AAACACAGCT TCGGGAACCG CCTTGAAAGT CACAAACCTC 
AGTAAATCTT TCGGAGGCGT CAAAGCGGTC GACAATATCA CGCTGAACAT AGCCAATGGA 
GAAATCCTCG GTCTGATAGG CCCGAACGGA TCGGGCAAAA CAACGTTCAT CAACCTCATA 
TCCGGTCTGT ATGCCCCCGA TCATGGCACA GTGGAAATCG CAGGAACTCA TCCGGCTCCC 
GGAAGTCTGA TGTCCGCATT TGCTGCAGGA GGTGCCCGTA CCTTTCAGAA TCTGCAACCA 
TTTTCCGGCT TGACGGCACT GGAGTCGATC ATGGTCTGTC AACGCAACAG CACCAAAGCT 
GAAGCGATCG GCTGGCTGCG CACCGTTAAC CTTGACAATA AGTCTCGATT GCTTTGTTCT 
GAAATGTCAT ATGGCGACTT GCGTTTTCTT GAAATTGCAC GTGCCCTTGC TACCCGCCCC 
CGCCTGCTGA TGCTCGACGA ACCGGCTGCG GGAATGTCCA TGCCTGACAT TACGAGACTT 
ATTGAACTTG TGACCTCAAT TAAACGAGCC GGCATTCCTG TCTTGCTCAT CGAACATCAT 
CAGGATGTCG TTGCTGAACT ATGCGATCGG GTTGCCGTCA TGGATGGAGG CCGGATGATT 
GCGCTTGGCA CACCGGATCA GGTACGATCC GACCCAAAGG TCATTGAAGC ATACCTTGGT 
GTAATTGAAA CAGATTCAAA ACCACTGTAA 

 

Protein sequence

MFFTIVSGLK EKTAERIIRI LLFTGLALFP SIWQGKFALG LLTLMAVYGI LLIGLDATVG 
YLGQVNLAQA ALFGLGAYGA ALAVQADAAF PVVLLAGITA ALLPGVALAL PTLRLEGPQF 
ALSTLSFATL SVIVLNEAES ITNGALGLSI TRPALFGFSL DATGFYWLCL IILAITWSAS 
QSLLKSRFGL AIEALRDSPI ATDALGIGTL RHKALAFAWG SALAGLAGAL HALNFGYLQP 
AAFGYDLMVI LLLGVVFGGR RSQWGSFTGA LVIAMLPNLL SNRTFFSSLA AAGFVIALIP 
VIRTLLSKKI PSFTAIAPAL AMMISSGLAF FAPNVEDWRK GIFALFLFAT VVGLPDGLAV 
ALAKTLRKLI RFSPDPLPQA MGGLRPLNTA SGTALKVTNL SKSFGGVKAV DNITLNIANG 
EILGLIGPNG SGKTTFINLI SGLYAPDHGT VEIAGTHPAP GSLMSAFAAG GARTFQNLQP 
FSGLTALESI MVCQRNSTKA EAIGWLRTVN LDNKSRLLCS EMSYGDLRFL EIARALATRP 
RLLMLDEPAA GMSMPDITRL IELVTSIKRA GIPVLLIEHH QDVVAELCDR VAVMDGGRMI 
ALGTPDQVRS DPKVIEAYLG VIETDSKPL