Gene Cpha266_1667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1667 
Symbol 
ID4571047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand+ 
Start bp1895093 
End bp1895779 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content47% 
IMG OID639766253 
ProductABC transporter related 
Protein accessionYP_912112 
Protein GI119357468 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCCAG TCATCATCAA TATGAAGTCT CTCTCCAAGT TTTATCAGAT GGGAGAACAG 
ACTGTCAAAG CACTCGACTC GATTGATCTT CAGTTCAAAC GCAACGATTA CACGGCCATC 
ATGGGACCTT CGGGAAGCGG AAAATCCACC ATGATGAATA TTATTGGCTG CCTCGACATC 
CCGACTTCGG GAATCTATGA GTTGAACGGT CAGAATGTCG CAGAAATGGA CGATAATGAA 
CTGGCAAGAA TCCGAAACCG TGAAATAGGA TTTGTTTTTC AAACCTTCAA TCTCCTTCCA 
AGACTCAACT GCCTGAGAAA TGTTGAACTG CCTCTGATTT ATGCCGGCAT AACCCCCGAA 
GAGCGCGAAC AAAGGGCTAC TGAGGCACTG CATCGCGTCG GGCTCGGCAA CAGGATAACA 
CATAAACCCT CAGAGTTGTC AGGAGGACAA ATCCAGCGTG TTGCCATTGC AAGAGCTCTC 
ATTAACAACC CGAGCATCAT CCTTGCTGAT GAACCTACAG GGAACCTCGA TACCGCTACC 
AGCATGGAAA TCATGGAAAT ATTCGGAAAC CTTTCCGATG CAGGCAACAC GATTATCCTT 
ATTACGCATG AAGAGGATAT CGCCCGCTAT ACCCACCGCG TCATACGGCT GAGAGATGGA 
AAAATTGAAA GCGACATACC GCAATGA
 
Protein sequence
MQPVIINMKS LSKFYQMGEQ TVKALDSIDL QFKRNDYTAI MGPSGSGKST MMNIIGCLDI 
PTSGIYELNG QNVAEMDDNE LARIRNREIG FVFQTFNLLP RLNCLRNVEL PLIYAGITPE 
EREQRATEAL HRVGLGNRIT HKPSELSGGQ IQRVAIARAL INNPSIILAD EPTGNLDTAT 
SMEIMEIFGN LSDAGNTIIL ITHEEDIARY THRVIRLRDG KIESDIPQ