| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1650 |
|---|
| Symbol | aspS |
|---|
| ID | 4571030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | - |
|---|
| Start bp | 1877655 |
|---|
| End bp | 1879475 |
|---|
| Gene Length | 1821 bp |
|---|
| Protein Length | 606 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639766236 |
|---|
| Product | aspartyl-tRNA synthetase |
|---|
| Protein accession | YP_912095 |
|---|
| Protein GI | 119357451 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0173] Aspartyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGAG CCGCAGGCAG CACGGAGACT CTGAAAAACC GGTTTCGTAC CGATTATTGC
GGGTTGTTGA ACCCGGAAGT TGAGCATCAG TCGGTAAAAC TCGGCGGCTG GGTTCACCGA
AAAAGAGATC ATGGCGGGTT GATTTTTATT GATCTGAGAG ATCATACCGG TATATGCCAG
ATTGTCATAC AGCCAGAAGA ACAGCAGTTG TTCGCCAAAG CCGAACAGCT TCATCTTGAA
TCGGTTATCT GTATAGAAGG GACTGTTGTA CGCCGAAGTC CCGGCGCAGT CAACCCCCGT
ATTCCTTCCG GCGAAATCGA GGTGGTTGCA GCAGGCATCA GTGTGGAAAG CAGTGCGCAT
CCGCTGCCGT TCCCTGTTGC CGATGAGGTG CAAACCTCCG AAGAGCTTCG GCTGAAGTAT
CGTTTTATCG ATTTGCGTCG GGATAAAATT CATGAAAACA TAATTTTCCG CAGCAGGCTG
ACCGCAGCCA TACGCCGGTA TCTTGAAGAA AAGTCATTTA TCGAGATACA GACACCTATT
CTCACATCGA GTTCTCCTGA AGGCGCCAGG GACTTTCTTG TACCAAGCCG ACTGCACCCC
GGGAAATTCT ATGCGCTTCC CCAGGCTCCG CAGCAGTTCA AGCAGCTTCT GATGGTATCG
GGATTCCCGC GTTACTTTCA GATAGCCCCC TGCTTCAGGG ACGAAGATGC CCGTGCCGAC
CGGAGTCCCG GCGAGTTTTA TCAACTTGAT ATGGAGATGG CGTTTATAGA GCAGGATGAC
CTTTTTGAGA TTCTTGAAGG GATGTTCAGT CATCTTACCG GGAGCATGTC GACAAAGCGT
ATCCGGGAGT TTCCTTTTCC GCGCATCAGT TTCAGGGATG TGATGAACCG GTACGGAACC
GACAAGCCTG ATCTGCGAAT TCCTCTTGAA ATCAGCGATG TCACCCATCT TTTTCTCCAA
TCCTCTTTCA AGGTGTTTGC CGCCAATACC AAAGAGGGGT GTTGTGTCAA GGCGATGCTC
GTGAAAGGAC GCGGTAACGA GTCGAGGCTT TTTTATGATA AAGCTGAAAA ACGCGCCAAA
GAGCTTGGTT CAGGAGGGCT CGCATACATA CAGTTCAGGG AAGATGGCCC GAAAGGCCCT
CTGGTGAAGT TTCTTTCAGG AGAGGAGCTT GCAGCCCTTC GCGAACTTCT TGGTGTCGAG
GTTGGCGATG TGGTGTTTTT CGGTGCCGGA AAGTGGGAAC AGACCTGCAG GATTATGGGC
GGCATGAGAA CCTATTTCAG CGATCTGTTT ACTCTTGATC GTGATGAACT TGCATTCTGC
TGGGTTGTTG ATTTTCCCAT GTACGAGTAT AACGAGGATC AGAAGAAGAT TGATTTTTCA
CACAACCCGT TTTCCATGCC GCAGGGTGAG ATGGATGCGC TTGAATCAAT GCCTCCACTC
AATATTCTTG CCTACCAGTA TGATATCGTG TGCAACGGCA TTGAACTTTC AAGCGGCGCC
ATAAGAAACC ACAGGCCGGA TATCATGTAC AAGGCGTTTG AGATTGCCGG TTACACAAAA
GAGGATGTTG ACAGCCGGTT CGGTCATATG ATTGAAGCCT TCAAGCTTGG AGCGCCACCT
CACGGAGGCA TCGCTCCCGG TCTCGACAGG CTGGTCATGA TTCTGCGTGA CGAGCAGAAT
ATTCGCGAGG TGATCGCATT TCCCATGAAT CAGCAGGCGC AGGATCTCAT GATGGGTTCT
CCGTCAGAGG TCACTCCCAT CCAATTACGG GAGCTGCATT TGCAGGTCGA GTTGCCGAAA
AAGGCTGAGG CGAAACCGTA G
|
|---|
| Protein sequence | MSRAAGSTET LKNRFRTDYC GLLNPEVEHQ SVKLGGWVHR KRDHGGLIFI DLRDHTGICQ
IVIQPEEQQL FAKAEQLHLE SVICIEGTVV RRSPGAVNPR IPSGEIEVVA AGISVESSAH
PLPFPVADEV QTSEELRLKY RFIDLRRDKI HENIIFRSRL TAAIRRYLEE KSFIEIQTPI
LTSSSPEGAR DFLVPSRLHP GKFYALPQAP QQFKQLLMVS GFPRYFQIAP CFRDEDARAD
RSPGEFYQLD MEMAFIEQDD LFEILEGMFS HLTGSMSTKR IREFPFPRIS FRDVMNRYGT
DKPDLRIPLE ISDVTHLFLQ SSFKVFAANT KEGCCVKAML VKGRGNESRL FYDKAEKRAK
ELGSGGLAYI QFREDGPKGP LVKFLSGEEL AALRELLGVE VGDVVFFGAG KWEQTCRIMG
GMRTYFSDLF TLDRDELAFC WVVDFPMYEY NEDQKKIDFS HNPFSMPQGE MDALESMPPL
NILAYQYDIV CNGIELSSGA IRNHRPDIMY KAFEIAGYTK EDVDSRFGHM IEAFKLGAPP
HGGIAPGLDR LVMILRDEQN IREVIAFPMN QQAQDLMMGS PSEVTPIQLR ELHLQVELPK
KAEAKP
|
|---|
| |