Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_1636 |
Symbol | |
ID | 4568581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | + |
Start bp | 1863449 |
End bp | 1864150 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639766220 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_912081 |
Protein GI | 119357437 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAACG AAAAAGTTTT TCTCATTACC GGCGCATCAA CCGGAATCGG TGAAGCCACC GCAAAGCGTG CCATCGAAGC AGGATACCGG GTTGTCGTTG CCGCCCGATC CACTGAAAAA CTTGAGGCGA TTGCAACCGA GTTTGGCAGA GAACGGGTTC TGGCCGTTAC CTGTGATGTT GCCGACTGGC AATCGCAGCA GCGGATGTTC CAGCAATCCC TCGAACGATT CGGACAGATC GATGTTGTTT TTGCCAATGC CGGTTTATCA AAAGGCTCCT CCTTTTACGG CGGTACGGAC AAACCGGATG AGTGGAAAGA GATGGTGATG GTCAATGTAT TCGGAGCTGC GGCTACAGCA AGACTGGCCC TGCCGGAACT CGCAAAAAGA TGCGGCCACT TTCTTTTGAC TGGTTCGGTA GTCGGACACA TTACCTCGAT TCGAAACTTC TACTCGGCAA CGAAGTGGGC GGTAACCGGA ATGGCCCATG CCATCCGCAA TGAAATGTCC GGAAGCGGCG TTCGTGTCAC CCTTATTGAA CCTGGCGTCG TTGATACTCC GTTCTGGGAT AACCTGCAGA AACCTGGAAC CCCGGAACTG CAGCCGGATG ATATTGCCCG AGCCGTCATC TACGCCGTCA CCCAGCCACA GCATGTTGAT ATCAATGATC TGCTTATACG CCCGACTGGT CAGCCGCATT AA
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Protein sequence | MQNEKVFLIT GASTGIGEAT AKRAIEAGYR VVVAARSTEK LEAIATEFGR ERVLAVTCDV ADWQSQQRMF QQSLERFGQI DVVFANAGLS KGSSFYGGTD KPDEWKEMVM VNVFGAAATA RLALPELAKR CGHFLLTGSV VGHITSIRNF YSATKWAVTG MAHAIRNEMS GSGVRVTLIE PGVVDTPFWD NLQKPGTPEL QPDDIARAVI YAVTQPQHVD INDLLIRPTG QPH
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