Gene Cpha266_1636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1636 
Symbol 
ID4568581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp1863449 
End bp1864150 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content53% 
IMG OID639766220 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_912081 
Protein GI119357437 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAACG AAAAAGTTTT TCTCATTACC GGCGCATCAA CCGGAATCGG TGAAGCCACC 
GCAAAGCGTG CCATCGAAGC AGGATACCGG GTTGTCGTTG CCGCCCGATC CACTGAAAAA
CTTGAGGCGA TTGCAACCGA GTTTGGCAGA GAACGGGTTC TGGCCGTTAC CTGTGATGTT
GCCGACTGGC AATCGCAGCA GCGGATGTTC CAGCAATCCC TCGAACGATT CGGACAGATC
GATGTTGTTT TTGCCAATGC CGGTTTATCA AAAGGCTCCT CCTTTTACGG CGGTACGGAC
AAACCGGATG AGTGGAAAGA GATGGTGATG GTCAATGTAT TCGGAGCTGC GGCTACAGCA
AGACTGGCCC TGCCGGAACT CGCAAAAAGA TGCGGCCACT TTCTTTTGAC TGGTTCGGTA
GTCGGACACA TTACCTCGAT TCGAAACTTC TACTCGGCAA CGAAGTGGGC GGTAACCGGA
ATGGCCCATG CCATCCGCAA TGAAATGTCC GGAAGCGGCG TTCGTGTCAC CCTTATTGAA
CCTGGCGTCG TTGATACTCC GTTCTGGGAT AACCTGCAGA AACCTGGAAC CCCGGAACTG
CAGCCGGATG ATATTGCCCG AGCCGTCATC TACGCCGTCA CCCAGCCACA GCATGTTGAT
ATCAATGATC TGCTTATACG CCCGACTGGT CAGCCGCATT AA
 
Protein sequence
MQNEKVFLIT GASTGIGEAT AKRAIEAGYR VVVAARSTEK LEAIATEFGR ERVLAVTCDV 
ADWQSQQRMF QQSLERFGQI DVVFANAGLS KGSSFYGGTD KPDEWKEMVM VNVFGAAATA
RLALPELAKR CGHFLLTGSV VGHITSIRNF YSATKWAVTG MAHAIRNEMS GSGVRVTLIE
PGVVDTPFWD NLQKPGTPEL QPDDIARAVI YAVTQPQHVD INDLLIRPTG QPH