| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1627 |
|---|
| Symbol | |
|---|
| ID | 4570678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | - |
|---|
| Start bp | 1848779 |
|---|
| End bp | 1850038 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639766208 |
|---|
| Product | phage integrase family protein |
|---|
| Protein accession | YP_912072 |
|---|
| Protein GI | 119357428 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0582] Integrase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAAAC GAATTCTCCC TCTTTCCGAT GCTCAGGTGA GCAAGGCCAA GCCGGCTGAA
AAGGATTATA AGCTTTCGGA TGGTGGTGGC TTGCATCTTC TTGTTACTAC CAGCGGTGGT
AAGCTTTGGC GTTTTCAGTA TCGTTTCGAC GGTAAACAGA AGCTGCTCGC TTTGGGGCAA
TACCCTGAAA TCTCCCTTGC TAATGCCCGG AAGCGGCGGG AGGAGGCTCG AACCCTTCTT
GCAAATGAAC AGGATCCCAG CGAGGCAAAA AAGGCTGCAA AAAAGGCTGA GGCATTGAAG
GATGCTTCGT CTTTTGAGCT TGTGGCCCGG GAGTGGTTCG GCAAGAATGA TCCGGTATGG
TCGCCGGGAC ATGCTTTGAC GGTGATGTGC CGGCTTGAGA AGGATGTGTT TCCGGCTATC
GGCAGCAAAC CGGTTTCTGA AATTACGGCT TCGGATATCC GGACAATGTT ACTGAAGATC
GAGGCCAGGG GGGCGGTGGA AACGGCTACA AGAATCAAGA TCATGTGTGG ACAGGTGTTC
AGGTATGCTG TGGCAACCGG AAGGCTTGAG CATGATCCTT CGGCGGCTTT GAAGTCGCGT
GAGATTTTCC GGAAACGTGA AATACGACAC CATGCCGCCA TTACGGATCC GAAAGAATTG
GCTCCCTTGC TGATGGCGAT TGATGAGTAT CAGGGAACCT TTGTGGTGAA ATCGGCTTTG
CAGCTTACTC CTTTGCTTTT TGTCCGGCCC GGTGAGCTTC AGAATATGGA GTGGTCAGAT
ATTGATTTCG AGGAGGCGTT GTGGTCAATT CCGGCGGAAC GCATGAAGAT GCGGCAGCCG
CACCTTGTTC CGCTTTCCCG GCAGTCATTG AGTATTTTGC AGGGGTTACA TCCTGCAACC
GGACATGGAA GATATGTGTT TACCGGACGT GGTAGCCGAC CAATGAGTAA TAATAGCATT
AATGCAGCCC TTCGATATCT GGGTTATGAC AGTGACACGG TTACCGGTCA TGGGTTCAGG
GCGACAGCCC GCACGATTCT TGATGAAGTT CTGGGTTTCA GGGTTGATTT GATCGAGCAC
CAGTTGGCTC ATGCGGTCCG GGATCCGAAC GGGCGCGCCT ATAATCGAAC CTCTTTTCTT
GACGATCGAC GGCAGATGAT GCAGGCTTGG GCGGATTATC TGTACAGCCT GAAGGCTGGG
GTGAAGATGC CGGCATCGGG AGTTTTACCC CTAACACGGA AAAAAAAGGC GCTTGTATAG
|
|---|
| Protein sequence | MPKRILPLSD AQVSKAKPAE KDYKLSDGGG LHLLVTTSGG KLWRFQYRFD GKQKLLALGQ
YPEISLANAR KRREEARTLL ANEQDPSEAK KAAKKAEALK DASSFELVAR EWFGKNDPVW
SPGHALTVMC RLEKDVFPAI GSKPVSEITA SDIRTMLLKI EARGAVETAT RIKIMCGQVF
RYAVATGRLE HDPSAALKSR EIFRKREIRH HAAITDPKEL APLLMAIDEY QGTFVVKSAL
QLTPLLFVRP GELQNMEWSD IDFEEALWSI PAERMKMRQP HLVPLSRQSL SILQGLHPAT
GHGRYVFTGR GSRPMSNNSI NAALRYLGYD SDTVTGHGFR ATARTILDEV LGFRVDLIEH
QLAHAVRDPN GRAYNRTSFL DDRRQMMQAW ADYLYSLKAG VKMPASGVLP LTRKKKALV
|
|---|
| |