| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1602 |
|---|
| Symbol | |
|---|
| ID | 4571125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | + |
|---|
| Start bp | 1818591 |
|---|
| End bp | 1821833 |
|---|
| Gene Length | 3243 bp |
|---|
| Protein Length | 1080 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639766183 |
|---|
| Product | helicase domain-containing protein |
|---|
| Protein accession | YP_912047 |
|---|
| Protein GI | 119357403 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.602122 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGGAA ACCACACAGA CCTGACATTT TTCACCAATG ATGCGAACCA GACGCTGCTC
GACAGGTTCA AAATCACGCT TTCCGATACG CAGCTTTTCG ATGTTTTGGT CGGCTACTTT
CGTGCAAGCG GCTTTTACCA GCTCTGCGAC AGCCTCGAAC CCATAGATAA AACGCGCATT
CTTGTCGGTC TCGGTATTGA CGAAGAAACC GGCCGTGCAA TCAGTGCCTG GCGTGAACAG
ACCACCATTG ATTTCGAATC CCATAAAACA GCCAAAGCCC AATTTCAGCA AACACTGATC
GAGGAAATCG AACACTCTGA AGAGACCGAT GAAAAGCTCG AACACGGCCT GAAAAAGTTC
ATAGCATTCC TGAAATCAGA ATGCACAGAC CCGGCAATCG ACCGCAACCG TGGCGGAAAT
GGCAGAAAAC TGGAAATCCG CGCCTTCCCA TCAAAAAACA TCCATGCCAA AGTCTATATC
GGCCGGTTCG CCCCTGACGA CCGTGATTTC GGTTTTGTCG TTACCGGTTC GAGTAACTTT
TCATATTCCG GTCTGGTTGC AAACCGCGAG TTCAATGTCG AACTTCGTCA GCGTCGCGAT
GTCGAATTCG CCCTCACTCA GTTTGAAGAA CTCTGGGCTC AATCGGTCGA TATTTCAGAG
GAATTCATTG ATGCCGTCCA GAAAAAAACC TGGATGAACG ACACCATCAC ACCTTACGAG
CTTTATCTCA AACTCATCTA CGAATACCTG CAGGAGGACA TCAACCTTCG GGACGACATT
CAGATATTTC TACCCGAAGG CTTCATGGCC CTGCAATATC AGCAGCAAGC TGTACAGCAG
GCAATCAAGA AGCTCAACGA ACACAACGGA GTCTTTCTGG CCGACGTCGT CGGTTTGGGA
AAAACCTTCA TTGCGGCCCA GCTTCTGCAG CAGCTCAAAG GGCGGATTAT AGTCATATGT
CCACCCGTAC TCAAAAGCTA CTGGGAATCG AGCCTTCACG ACTTCCGGGT TCCTGCCCGT
GTGGAATCAC TCGGCAAGCT CGATAAAGTC ATACGTTTCG GACTTGACCG TTTCGACTAC
GTTGTCATCG ATGAAGCCCA CCGGTTTCGG AACGAGAACA CCCGGTCCTA TGCAGACCTG
CTCGACATCT GCCGAGGCAA GAAAGTTATC CTGGTAACCG CTACGCCGCT CAATAACACT
ATCGACGACA TATTCTCTCA GCTCAAACTC TTTCAGGTTC CGAAAAACTC CACGATCCCC
GGTATTCCGA ACCTTGAGCG CTATTTCACA TCGTTACGTA AACACTTCAA CGGCCTTGAT
CGTACCGACC CTGCATACAA ACATGCTATC AAGGAAGTCT CGCAGGAAAT TCGCGAACGT
ATTCTCAAGC ATGTCATGGT ACGTCGTACC CGTACCGACG TCATAACATG GTTCAAAAAC
GATATAGAAA GTCAGGGCCT CTTTTTCCCC GAAGTTCAGG AGCCACGCCG CATTGTCTAC
ACATTTGAAG GTGAACTTGA AACCATTTTC AACCGGACGA TCGGCCTGCT GCGAGAGTTC
CATTATGCCC GTTATATACC CTTGCTCTAC TATACCGGCA GTCGGCAGCT TTCGGAATTC
GAACGGCAGC AGCAGCGCAA CGTTGGCGGC TTCATGCGAG GAATCCTTAT CAAACGCCTC
GAAAGCAGTT TTTATGCGTT CCGCAAGAGT GTTCGCCGTT TTATCGAGTC CTATGAGCGC
TTTCTACACA TGTACAATGG AGGAACCATA TACATCAGCC GCAATATCGA CGTCTACGAC
CTTCTCGACA GCGATGATTT CGAAACACTT GAACGCTACG TTGAAGAGGA AAAAGCGCAG
AAATACGCTT CAGAAGACTT CCGCAACGAC TTCATCACAG ACCTTCAACA CGACATGCAG
CTCCTGCGCC AGATCGAACA GCTCTGGCAG GATGTTACAG AAGATCCCAA GCTCGACGCA
TTCACTGACC GGCTTCGGAA TGATCCCGTT CTGAAAAAAC GTATGGTCGT TTTTACAGAA
TCGAAAGAAA CCGGCGACTA TCTGTTTGAA CAGCTCAACA GGCTTTGGCC CGGTAAGATT
ATGTTTTTCA GCAGCAAAGG CGGGCGCACA GGCGACCCAG CCAAAACGCA TGCCCCGGCA
CAAGCCCGCG ACCTTATCAA AACAGCATTC GACCCGAACG AAAAAAGCTG CGATGAGAAC
ATCCGCATTC TCATTGCCAC AGATGTTCTC TCCGAAGGAA TCAACCTGCA TAGGGCAAAT
GTTCTGATCG ACTACGACCT GCCATGGAAT CCCACCCGTG TGCTCCAGCG TGTCGGCAGG
GTTAATCGTC TCGGAACAAA ACATCCCGAC ATCTACATCT ATAATTTTTT CCCCACAACA
CAATCCGACT CGCATCTTCA GCTCGAAGCC AATATCACCA ACAAAATTCA GATGTTTCAC
GACATCCTCG GAGAAGACGC CAAATACCTT TCAGATGGTG AGGAAATTGG CAGCCAGGAA
CTTTTCGATA CACTGAACCG CAAGCAGGCC TATACCGGCG AAGATGAAGC CGGCGATTCC
GAACTACGCT ACCTTGAAAT GATGCGCAAC CTTCGGGACA AACACCCCGA TCTTTTCGAA
AAGATCAAAC GTCTGCCAAA AAAGGCGCGA TCCGGACGAA AGCTTTCCGG TCTCGATACC
GACCGTCTCG TCACCTTTTT CCGTATCGGT CAGCTGAAAA AGTTCTATCT CAACGAGGGC
GTTGAAAGCA GGGAAATAAC CTTCTTCGAT GCGGCCTCAC TGCTCGAATG TCAGCCTGAA
ACGCCCCGGC AGGCCATTCC TGCAGCCTAT TATCATTGGC TCGAAACCAA CAAACAGCGG
TTTGGGCTCG ATGCCATGCA GGAAGAAGCC CCATCAACCA CTTCAGGCGG TCGTTCTAAC
AGCAGCTATA TCGAAAGACG GTTGAAAGAA AGGGCATTCC GAACCTGCCA GAAATTTACC
GAACCCGATG AGGAGTTCAT CGACGGAGTG CTTCGCATGT TAACTCAGGG GCTGATTGCC
AAAAAGACCG CGCAGACGGT CAAGAAAGCC CTTGAAAAAA CCGACGATCC TCTCGATATG
CTCACTATTC TGCGCAAGCA CATCCGGAAA GAGAGCGAAC CCGTTTCTCA AACGGTCAAA
TCGTCGAGGG CTTGCCGGGA AATCATTCTT TCAGGCTATC AAGTTTCAGG AGACGGAGAG
TAG
|
|---|
| Protein sequence | MSGNHTDLTF FTNDANQTLL DRFKITLSDT QLFDVLVGYF RASGFYQLCD SLEPIDKTRI
LVGLGIDEET GRAISAWREQ TTIDFESHKT AKAQFQQTLI EEIEHSEETD EKLEHGLKKF
IAFLKSECTD PAIDRNRGGN GRKLEIRAFP SKNIHAKVYI GRFAPDDRDF GFVVTGSSNF
SYSGLVANRE FNVELRQRRD VEFALTQFEE LWAQSVDISE EFIDAVQKKT WMNDTITPYE
LYLKLIYEYL QEDINLRDDI QIFLPEGFMA LQYQQQAVQQ AIKKLNEHNG VFLADVVGLG
KTFIAAQLLQ QLKGRIIVIC PPVLKSYWES SLHDFRVPAR VESLGKLDKV IRFGLDRFDY
VVIDEAHRFR NENTRSYADL LDICRGKKVI LVTATPLNNT IDDIFSQLKL FQVPKNSTIP
GIPNLERYFT SLRKHFNGLD RTDPAYKHAI KEVSQEIRER ILKHVMVRRT RTDVITWFKN
DIESQGLFFP EVQEPRRIVY TFEGELETIF NRTIGLLREF HYARYIPLLY YTGSRQLSEF
ERQQQRNVGG FMRGILIKRL ESSFYAFRKS VRRFIESYER FLHMYNGGTI YISRNIDVYD
LLDSDDFETL ERYVEEEKAQ KYASEDFRND FITDLQHDMQ LLRQIEQLWQ DVTEDPKLDA
FTDRLRNDPV LKKRMVVFTE SKETGDYLFE QLNRLWPGKI MFFSSKGGRT GDPAKTHAPA
QARDLIKTAF DPNEKSCDEN IRILIATDVL SEGINLHRAN VLIDYDLPWN PTRVLQRVGR
VNRLGTKHPD IYIYNFFPTT QSDSHLQLEA NITNKIQMFH DILGEDAKYL SDGEEIGSQE
LFDTLNRKQA YTGEDEAGDS ELRYLEMMRN LRDKHPDLFE KIKRLPKKAR SGRKLSGLDT
DRLVTFFRIG QLKKFYLNEG VESREITFFD AASLLECQPE TPRQAIPAAY YHWLETNKQR
FGLDAMQEEA PSTTSGGRSN SSYIERRLKE RAFRTCQKFT EPDEEFIDGV LRMLTQGLIA
KKTAQTVKKA LEKTDDPLDM LTILRKHIRK ESEPVSQTVK SSRACREIIL SGYQVSGDGE
|
|---|
| |