| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1563 |
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| Symbol | |
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| ID | 4568937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | - |
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| Start bp | 1775155 |
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| End bp | 1778340 |
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| Gene Length | 3186 bp |
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| Protein Length | 1061 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639766145 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_912009 |
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| Protein GI | 119357365 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0198604 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAAA AGTTTATAAC CAGACCGGTT CTTGCCACAG TGATATCAGT TGTGATCGTC
ATTCTCGGTC TCATCAGTAT CAAGCAGTTG CCGATTGCCC AGTTTCCCGA TATTGCGCCG
CCGAGTGTTA TGGTAACCGC AGTCTATCCG GGAGCAAGCG CTGAAACACT TGCCCGCTCC
GTTGCGCCAT CACTTGAGGA GGCGATTAAC GGTGTTGAGG GGATGACCTA TATCACGTCA
ACCTCCGGAA ATGACGGGGT GCTGAAAATA ACCGTGAATT TTGCTCTCGG TACCAATCCC
GATCAGGCGG CGGTTAACGT TCAGAACAGG GTGGCGCAAG CCCAGAGCAA GCTTCCTGCC
GATGTTATTC AACGTGGTAT TACGGTGGTC AAGCAGTTGG CCAGTATGAT GATGGTGGTG
ACTCTTTTTT CCGATACAGA TAATTATGAT GAGACCTTTC TTCAGAACTA CGCGAAGATC
AACCTTGTTC CCGAGATTCA GAGAGTTCAG GGGGTAGGGT TGGCAAGTGT TTTCGGCAAC
AGGGATTATT CCATGCGTAT CTGGCTGAAC CCTCAGAAGA TGGCGGCATA CAAACTGACC
GTGCCGGAGG TGAGCGCCGC GATCAAGAGC CAGAGTGTTG ATGCGGCTCC GGGCAAGTTT
GGCGAAGGGA GCCTGGAGGT GATGGAGTAT ATTATCAAGT ACAAGGGAAA ATTGAAAGAG
GCAGGTGAGT ATGAGAATAT CGTCGTCCGT TCAAACAGCG ACGGTTCTCT GCTGAGACTG
AAGGATGTCG CCCGCATTGA GTTTACTTCA TATGACTTTT CGGTCAACAC GAAAGTCAAC
GGCAAGCCTG CTGTTGCCAT GGCTATCTAC CAGACAGCCG GTTCAAATGC TGATGCTGTT
CAGACCGAAC TCTACAAAGT TGTTGAAGCT GCCTCGAAAT CCTTTCCCGA AGGGATAAGC
TATGCCGTTC CCTTGAGTAC GAAAAAGCCG CTTGACGAGT CCATTGAACA GGTTCTTCAC
ACGCTTGTTG AGGCCTTTAT CCTTGTGTTT CTTGTGGTGT TTGTTTTTCT TCAGGATTTT
CGCGCCACCT TGATTCCTGC CATTTCGGTG CCAGTAGCTA TTATCGGTAC CTTTTTTTGT
ATGAGCCTGT TCGGGTTCTC GATCAACCTT CTGACGCTTT TTGCTCTGGT TCTTGCTATC
GGCATTGTTG TTGATGATGC TATTGTTGTT GTAGAGGCGG TGTATGCAAA GATGGAGGGA
GAGCATCTTG CCTCAAAACC GGCAACTGTT CTTGCCATGA GCGAAATTAC CGGGGCTATT
GTTTCCATTA CGCTTGTCAT GTCATCGGTG TTTCTGCCTG TTGCCTTGAT GGGTGGATCG
ACAGGAGTGT TTTACCGTCA GTTCGCCCTC ACCCTTGCCT CGGCTATTTT TATTTCCGCG
ATCAACGCTT TGACGCTGAG TCCCGCACTT TGTGTGATTT TTCTTAAAAA CTCTCATGGC
CAGAAGGATA AGGCGACGGC GAAAGGCATC AAAGGGTATG CGAATCGATT CTTTACGGCC
TTTAATACGG CGTTTTCCGC TCTGACTGAA AAATATGTCG CCAGCCTTCA ATTTTTAATA
GGTAAAAAAT GGATAGGCCT TGGGGCTCTT GGTATTGTTA TTGCGATGAC GATCCTCTTG
TTCAAGACAA CTCCGTCCAG TTTTATTCCC AATGAAGATA ACGGGTTTCT TATGATTACC
ACGAATCTCT CTCCGGGAGC ATCACTGAAA AGAACCAACG ATGCAATGCA GCAGGCTGAT
AAATTGTTGG AAAAGGAGGA AAGTGTTAAA AGGGTTGTGG CTGTTACGGG CGTCAACATG
ATTACCGGCT CGACGTCATC CTCTTCCGGT GTGATGTTTG TGGAACTGAA TGATCCCGAG
GAAAGGGGTG CCGTGTCAAA TATTGACGAT CTGATTACGA GATTTTCAAA AAAGCTTTCG
CCGATCAGCG AGGCTCTTTT TATTGTGATG AAAAGACCGA CGGTTCCGGG CTTCGGCAAT
GTCAGCGGGG TGGAAATGGT GCTTCAGGAT CGCTCTGCCG GAAGTCTTCA GGAGTTCAGC
GGTGTAGCAA AGGGGTTTAT CGGTCAGCTC ATGAAACGGC CTGAATTTGA ATTTGTCTAT
ACTTTTTTCA ATACCGGCAA TCCTCAGTAT GAAATTATTG TTGACAATCA AAAGGCTGCG
CAGCTCGGAG TCAATGTCCA GGATGTCCTT CTGGTCATGC AGGGTTTTTA CGGAGGCATG
CAGGCATCTG ATTTCAACCG TTTCGGTAAA TATTATCGTG TGATGATGCA GTCTGAACCA
AGGGACAGAA CCGACCCTTC AACCTTGAAC AGCATTTTTG TTCGAAACAG TTCCGGTTCC
ATGGTGCCGG TCGCTTCGGT GGCGTCGCTC AAAAGGGTCT ATGGCTCTGA AACCGTAGAT
CATTTCAACC TTTTTAACTC CATAGGCGTT ACGGCCAATG TCAAAAAAGG GTACAGTACG
GGACAGGCTA TTCAGGCGAT TGAGGAGGTT TCCCCGAAGG CGCTTCCCCC CGGATTTACT
CTTGACTGGA AGGGAATGAG CCGCGAAGAG ATCAAGTCCG GTGGCGCCGC AACCCAGATA
TTCATTCTCA GTATTGTTTT TGTTTATCTG CTTCTTGCAG CCCAGTATGA AAGCTATATT
CTTCCCCTTG CCGTCATGCT CTCCATTCCT TCCGGTCTGT TTGGGGTTAT GCTCGGGGTC
AAAGCCGGAG GTATGGACAA TAATATTTAC GTACAGGTTT CAATTATCAT GCTTATCGGT
CTGCTTGCGA AAAACGCTAT TCTGATTGTT GAATACGCGA TTCAGCGCCG AAGATCGGGA
GTCGGGCTTG TTGAATCGGC AATTGAGGGT TCAAAGGCAA GATTGCGTCC GATTCTTATG
ACCTCCTTTG CCTTTATTGT GGGACTTTTA CCGTTGCTTT GGGCTTCCGG TCCATCAGCG
CTTGGCAATC GCTCTATCGG CTGGTCCGCA GTGGGCGGCA TGTTAAGCGG CGTTGTTCTT
GGCGTGTTGA TTATTCCTGT GCTGTTTGTC GTATTTCAGG CCATTCAGGA AAGGTTCACA
GGGCCGGCCA AACCACTTGA AGAAATTCAT GCGGCTGATT TAAAGGCCAG ACGTGGAAAG
GTTTGA
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| Protein sequence | MFEKFITRPV LATVISVVIV ILGLISIKQL PIAQFPDIAP PSVMVTAVYP GASAETLARS
VAPSLEEAIN GVEGMTYITS TSGNDGVLKI TVNFALGTNP DQAAVNVQNR VAQAQSKLPA
DVIQRGITVV KQLASMMMVV TLFSDTDNYD ETFLQNYAKI NLVPEIQRVQ GVGLASVFGN
RDYSMRIWLN PQKMAAYKLT VPEVSAAIKS QSVDAAPGKF GEGSLEVMEY IIKYKGKLKE
AGEYENIVVR SNSDGSLLRL KDVARIEFTS YDFSVNTKVN GKPAVAMAIY QTAGSNADAV
QTELYKVVEA ASKSFPEGIS YAVPLSTKKP LDESIEQVLH TLVEAFILVF LVVFVFLQDF
RATLIPAISV PVAIIGTFFC MSLFGFSINL LTLFALVLAI GIVVDDAIVV VEAVYAKMEG
EHLASKPATV LAMSEITGAI VSITLVMSSV FLPVALMGGS TGVFYRQFAL TLASAIFISA
INALTLSPAL CVIFLKNSHG QKDKATAKGI KGYANRFFTA FNTAFSALTE KYVASLQFLI
GKKWIGLGAL GIVIAMTILL FKTTPSSFIP NEDNGFLMIT TNLSPGASLK RTNDAMQQAD
KLLEKEESVK RVVAVTGVNM ITGSTSSSSG VMFVELNDPE ERGAVSNIDD LITRFSKKLS
PISEALFIVM KRPTVPGFGN VSGVEMVLQD RSAGSLQEFS GVAKGFIGQL MKRPEFEFVY
TFFNTGNPQY EIIVDNQKAA QLGVNVQDVL LVMQGFYGGM QASDFNRFGK YYRVMMQSEP
RDRTDPSTLN SIFVRNSSGS MVPVASVASL KRVYGSETVD HFNLFNSIGV TANVKKGYST
GQAIQAIEEV SPKALPPGFT LDWKGMSREE IKSGGAATQI FILSIVFVYL LLAAQYESYI
LPLAVMLSIP SGLFGVMLGV KAGGMDNNIY VQVSIIMLIG LLAKNAILIV EYAIQRRRSG
VGLVESAIEG SKARLRPILM TSFAFIVGLL PLLWASGPSA LGNRSIGWSA VGGMLSGVVL
GVLIIPVLFV VFQAIQERFT GPAKPLEEIH AADLKARRGK V
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