Gene Cpha266_1531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1531 
Symbol 
ID4569581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand+ 
Start bp1739791 
End bp1740429 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content48% 
IMG OID639766113 
Productthiamine monophosphate synthase 
Protein accessionYP_911977 
Protein GI119357333 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase 
TIGRFAM ID[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCCCC CATCACCTCA ACTTCCTCGC CTTTATCTGG TAAGCAGCGG CTTCAATTCC 
CGGGATTCTT ATACTCAGCT TGAAAATCAG GTTACCTGTT TTTCAAGTTC TTGCCCCTGC 
ATTGTCCAAA TACGAGAAAA GATGCTTGAT GCCAAAACCC TTTTTGAACT CTCCTGCTCC 
ATTGCACCCG CCATCATTGC GGCAGGATCG ATGGTTGTCA TCAACGAGCG GGTTGATATT 
GCCCTTGCTG CGGCACTCAA TGGGGTACAT TTTCCTGAAA ACTCCTCTCC TCCAGAGAGA 
TTCAGAGCGA TGACAAAAGG AAAAATTCTC GGTCAAAGCA CTCATTCGCT TAAGACTGCT 
CGTATAAGCC AGCAGGCGGG GGTTGATTAT ATCCTGTTCG GGCCAGTATT CGATACCCCC 
TCCAAAAGAG GTTTCGGGCC GCCTCAGGGT TTACTTAATC TCGCTGCTGT ATGCGAGGCA 
ACATCATTGC CGGTCTATGC AATCGGAGGA GTAACTCCTG AAAATGCTTC TTTATGCCTT 
GATTCCGGCG CATATGGAGT TGCCGCTCTC TCGCTGTTTA TGGATACCAC TCGCCTGGTC 
AATACGCTTG ATAAATTTCA TCGACTTCTG TATTCATGA
 
Protein sequence
MTPPSPQLPR LYLVSSGFNS RDSYTQLENQ VTCFSSSCPC IVQIREKMLD AKTLFELSCS 
IAPAIIAAGS MVVINERVDI ALAAALNGVH FPENSSPPER FRAMTKGKIL GQSTHSLKTA 
RISQQAGVDY ILFGPVFDTP SKRGFGPPQG LLNLAAVCEA TSLPVYAIGG VTPENASLCL 
DSGAYGVAAL SLFMDTTRLV NTLDKFHRLL YS