Gene Cpha266_1485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1485 
Symbol 
ID4570274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp1684063 
End bp1684833 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content52% 
IMG OID639766070 
Productputative reverse transcriptase/maturase family protein 
Protein accessionYP_911935 
Protein GI119357291 
COG category[L] Replication, recombination and repair 
COG ID[COG3344] Retron-type reverse transcriptase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTACG GTAAGGAGAA GTCAGACCTG CTGATAGTAC CTGAGAAGCA GGCGAACAAT 
GCGGGAAATC CTGCGGCGGA GTCTGTGGAG GGAAGCGGTG GGAACAAGAG GAATGCGGAA
GAGCAAAACA CGGTCCGGAC GCAGAGTCGG GGTTCCGTGT CCCAAGCGCA GGCCCGCATA
CGCGAAGCGG TAACCAGAAA TCGAGGGGAG AAGCTAACAG CGCTTTTGCA TCATGTCACG
ATAGACAGCC TGCGATGGTC GTTTTACCAA TTGAGGAAGA ACGCCGCAAC AGGTATAGAT
GGAGTGATAT GGAAGGATTA CGAGGTAGGA CTGGAGGACA AACTTGCAGA CCTGAACCGA
CGAGTCCATA CTGGAGCGTA CCGGGCACAG CCATCACGCC GGAAGTACAT ACCAAAGGCG
GATGGTAAAC AGCGACCGCT CAGCATAGCT GCGCTGGAAG ACAAGATTGT TCAGCGAGCA
GTGGTGGCGA TCCTCACGCC GATCTACGAA GCGGATTTTT TGGGGTTTAG CTATGGATTC
CGACCGGGGC GCAGCCAGCA CAATGCACTG GACGCACTGG CCTATGGAAT CAAGGTGAAG
AAAATCTGCT GGATTTTAGA TGCCGATATT TCCCGGTTTT TTGACACAAT CAGTCATGAA
TGGCTGATTC GATTTATCGA ACACCGGATT GGTGACAAAC GTATCGTCCG ATTGATTATC
AAGTGTACGT GGAGGAGGGG ACGCTCACAA CTACGTAAAC TAATGCGATA A
 
Protein sequence
MMYGKEKSDL LIVPEKQANN AGNPAAESVE GSGGNKRNAE EQNTVRTQSR GSVSQAQARI 
REAVTRNRGE KLTALLHHVT IDSLRWSFYQ LRKNAATGID GVIWKDYEVG LEDKLADLNR
RVHTGAYRAQ PSRRKYIPKA DGKQRPLSIA ALEDKIVQRA VVAILTPIYE ADFLGFSYGF
RPGRSQHNAL DALAYGIKVK KICWILDADI SRFFDTISHE WLIRFIEHRI GDKRIVRLII
KCTWRRGRSQ LRKLMR