| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1411 |
|---|
| Symbol | |
|---|
| ID | 4568496 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | - |
|---|
| Start bp | 1607342 |
|---|
| End bp | 1607884 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639765998 |
|---|
| Product | tRNA/rRNA methyltransferase (SpoU) |
|---|
| Protein accession | YP_911864 |
|---|
| Protein GI | 119357220 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0566] rRNA methylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000159184 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGT TTAGAAAGCT GTCAGGACTG GAGATGAACC GGTTGGACGC GAAGAGCGTT
TTTGATGTAC CAAGGCATCC GGTTACTCTT ATGCTCGATA ATATCCGAAG CATGTGGAAC
GTGGGGGCAA TGTTCAGAAC AGCGGATGCT GCGGGCATTG AAAAGATCAT TCTGACCGGC
TATACGGCAG CGCCTCCGAG AAAAGAGATC GATAAAACCG CCCTTGGCGC CCAGGAAACG
GTGCGTTGGG AGTATTGTGA GAGCGCTCTT GAGGCCATAG CAACGCTTAA AGCGCGCGGC
GTGAAAATCT GCGCACTTGA AATAGCCGAG CCGAGCCGCC CCTATACGGC AATGCGAAAG
ACGGATTTTC CTCTTTGTCT TATTGTTGGC AATGAGGTTG ATGGTATCGG GGACGAGCTG
CTTCGAGAGT GTGACGAGGT GATTGAAATT CCGCAGTATG GCGCAAAACA TTCTCTGAAT
GTCGCAGTTG CTGCTGGCGT TTCGCTTTTC GAGTTTATCA GGGTGATTCG CGCAACCCTG
TAA
|
|---|
| Protein sequence | MSQFRKLSGL EMNRLDAKSV FDVPRHPVTL MLDNIRSMWN VGAMFRTADA AGIEKIILTG
YTAAPPRKEI DKTALGAQET VRWEYCESAL EAIATLKARG VKICALEIAE PSRPYTAMRK
TDFPLCLIVG NEVDGIGDEL LRECDEVIEI PQYGAKHSLN VAVAAGVSLF EFIRVIRATL
|
|---|
| |