Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_1402 |
Symbol | |
ID | 4569311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 1595832 |
End bp | 1599065 |
Gene Length | 3234 bp |
Protein Length | 1077 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639765989 |
Product | DNA helicase/exodeoxyribonuclease V, gamma subunit |
Protein accession | YP_911855 |
Protein GI | 119357211 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.937343 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCTGC ATCTCTACAC GGGCAACCGG ATGGAAACGC TTGTCGATGC GCTGGCGGAA GTTCTGGGTC GTAACCCGCC ATCTGTTTTC GAATACGAGA AAATAGTGGT GCAGAGCCGC GGCATGCAGC GGTGGATTTC CATGGAGCTT GCGCGGCGGT TCGGCGTTTG GGCCGGTGCG GAGTATCCCT TTCCGAACAG GCTGCTGCAG CAGCTCTTCG AGGAGATGGA GCTGACGCAG CCCGACTCCT CAACGTTTTC GAAAGAGGTG ATGTGCTGGA GTATGATGCG CCTTCTGCCG GAGATGCTCG ATCGGGAACT GTTTTCGCCC CTGCGATCCT ACCTGCGGAA CGACAGGGAC GGGCTCAAGC TCTTCCAGCT CTCCGGCCGT ATCGCCGATA CCTTCGACCA GTACACCCTT TTCCGTACCG ACCTTCTCGC CGCATGGGAA GAGGGGCGGG ACGACGGGGC CCGCGACTGG CAGCCGGAAT TATGGCGGGC GCTGGTTGCG GAGAGTTCCG GCAAGCATCG TGGCCGTCTG AAAACGGAGT TCTGCCTCAA GGTTCGGCAC GCGTCGCTTC CGGCTGGATT TCCGAAGCGG ATTTCGCTCT TCGGCATCTC CTACATGCCG CCCTACCATA TCGGGATGAT CGAAGCCCTG GCGACGAGGA TACCGGTCAA CATCTTCCTG CTGAGCCCGA CGCAGGAGTA CTGGTCGGAT ATCGTTTCCC GCAGAAAGCT CTTCCGGATG AGCGAGGGCG AACGGGAACT GAGCACCGAG GGCAATCCGC TGCTTGCCTC GCTCGGCAGA AGCGGCCGGG AGTTCGCCGA TCTCCTGCTC GAAGCCGGCG GAATCGAAAA CGAGCACGAC CTCTACATCG AACCCGCCGA CGACACCCTC CTGCACGCCC TGCAGTCCGA CATGCTCAAC CTGAGCGGAA CGGGGGAGGA GGGGGAGCGC CGTCCCGCGC CGGAACGCGC CGACCGTTCG GTTCAGGTGC ACTCCTGCCA CAATCCGCTG CGTGAGGTCG AGGTACTGCA CGACAACCTG CTCGATCTTC TCGAACGCCT ACCCGGTCTG GAACCGCGGG AGATCGTCGT GATGACGCCC GAGATCGAGA CCTATGCACC CTATATCGCT ACGGTTTTCG GCTCTTCCGG CGATGGCGTG TCGCGCCTGC CGCATTCGAT AGCCGACCGC CGCATGCTCG ACGAGGGTGG CATAGCCCCG GCCCTGCTGA AGCTGCTCGA GCTCTACGGC AGCCGTCTTC CTTCTCCGGA TATTTTCGAT CTGCTCTCTT CGCCGCCGGT GAGCCGACGC TTCAGGCTTG ACGAAGAGGA ACTCGATACC ATTCGCGTCT GGGTGGCCGA TACGCGAATC CGCTGGGGTA TGGACGAACG TTCGAGGAGT GGTCTCGGCC TGCCCCCCTT CCGCGATAAC TCGTGGAGGG CCGGTCTGGA GCGGCTGCTG CTCGGCTATG CCATGCCGGA CGAGGGGGTG CTTTTCGACG GCGTTCTGCC CTTCGACGTC GAGGGCGATG CGGAAACCCT CGGCAAGTTC GCCGATTTCA TCGATGCCCT CGAAGCGCTC TCAGCAAGGT TCGATCGGCC CCGAACGCTC GACGGATGGC GGGATCACTT TATCTGGATG CTTGATATCT TTATCGATGC CGATGAGGAG GTCGAAAGGG AGCTCTCGCA CATCGCAGCC GAAATCGACA AGCTTACGGA ACTCGCCGGA GAGGCCAGTT TCGGGGGCGA GACGGCGGCC CCGGTGATGA TCGCCTGGCT GCGCGGCCGT CTCGAAAAGT TCGAGATGGG GCTTGGCTTC ATGACCGGCG GCATCACCTT CTGCGCCATG CTGCCGATGC GCAGCATTCC GTTCCGCGTG GTTGCCATGA TCGGCATGAA CGACGGGGCT TTCCCCCGCC AGCAGCGTCT GCCGGGTTTC GACATGATGT CGAGGGAGCC GCGCAAGGGC GATCGTTCCG TGCGGGGCGA CGATCGTTAT CTCTTTCTCG AATCAATTCT CTCCGCACGC GACGTCCTCT ACCTGAGCTA TGTCGGCCAG AGCATCCGGG ATAACAGCGA ACAGCCGCCC TCCGTGCTGG TGAGCGAACT GCTCGATGCC ATAGAGCGGG GTTTCGCCTT TTCCGAAGGG GAGGACGCAA TATCGCGCAT GGTTGTGCGG CACAAGCTTC AGGGGTTCAA TCCCGCATAC TTCACCGAAA GATCGCCACT TTTCAGCTAC TCGGACGATA ACTTCCGGGC GCTTGCATGT CGCGATGAGC GCAATGCAGG TAATGGGAGC AGGGGGCGAA ATCCGGTCGA AGCCCGCCCC TTTATGGACG AACCGCTTCC TGAGGCTGAC GACGGGGATC GCCGGGTGAC GATCGACGAT CTGGTGAAGT TTTTCGCCAA CCCCTCGGCA TTCTTTCTCG ACCGGCAGCT CGGACTGAAA CCCTCGGCAG CGCTCCGTCC GCTCGAAGAG CGGGAGCCCT TCGGCGCAGA GGGTCTCGAC GCATATATGA TGCGCCAGGA ACTGCTTGCA GCGGTGCTCG AAGGGGGAAA AGAAGAGGCT CTCCTGCCCC TGTTTCGGTC GAGAGGGCTC TTGCCGCCGG CCCGACACGG CGAGTTGCTC TTCGGAGAGC TGCTTGCCGA GGTGAGGGAG TTCGCCGACA GGCTTCCGGA GCTCAAGGGG AGCGCTGCGC CTGCCGTGCT TGAAGCCGAT CTCGACATCG GGGGATTCCG GCTGACCGGC AGGCTCGACC ATCTTCTGCC CTCCGGGCAG CTGCTCTATC GCTGCGCGAA GATGCGGGAG AAGGATCGCA TCGGTTCATG GATTCTGCAC CTCGTGCTCG GTGCGTGCAG TCCGGGTCAT ATGCAGGAGA CCCGTCTCGT CATGCTCGAC CGTGCCGTCA GGTACACTCC CGTGGCCGAC GCCTCAGGCA GGCTCGAAAC CATGCTTTCG CTTTACCGGC AGGGGCTCCT GGAGCCGTTG CCCTTCTTCC CCCGCGCCTC TACGGCCTGG GCCGGCAAGG CGGAAAAGAC GGAGCGCGAG CGTATCGAAG CCGCCCTGGC TGCATGGCGT GAAGGCTACG GCGGACGCGA AGGCGAGGGT GCCGATCCGG CCTTCCGCCG CTGTTTCGGC ACGGAGCCGC CCCTCGGCGA GCGCTTTGCA GCCATTACCG AAGAGGTGTT ATTGCCGATG CTTGAACACG GAGGCAAGGG ATGA
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Protein sequence | MTLHLYTGNR METLVDALAE VLGRNPPSVF EYEKIVVQSR GMQRWISMEL ARRFGVWAGA EYPFPNRLLQ QLFEEMELTQ PDSSTFSKEV MCWSMMRLLP EMLDRELFSP LRSYLRNDRD GLKLFQLSGR IADTFDQYTL FRTDLLAAWE EGRDDGARDW QPELWRALVA ESSGKHRGRL KTEFCLKVRH ASLPAGFPKR ISLFGISYMP PYHIGMIEAL ATRIPVNIFL LSPTQEYWSD IVSRRKLFRM SEGERELSTE GNPLLASLGR SGREFADLLL EAGGIENEHD LYIEPADDTL LHALQSDMLN LSGTGEEGER RPAPERADRS VQVHSCHNPL REVEVLHDNL LDLLERLPGL EPREIVVMTP EIETYAPYIA TVFGSSGDGV SRLPHSIADR RMLDEGGIAP ALLKLLELYG SRLPSPDIFD LLSSPPVSRR FRLDEEELDT IRVWVADTRI RWGMDERSRS GLGLPPFRDN SWRAGLERLL LGYAMPDEGV LFDGVLPFDV EGDAETLGKF ADFIDALEAL SARFDRPRTL DGWRDHFIWM LDIFIDADEE VERELSHIAA EIDKLTELAG EASFGGETAA PVMIAWLRGR LEKFEMGLGF MTGGITFCAM LPMRSIPFRV VAMIGMNDGA FPRQQRLPGF DMMSREPRKG DRSVRGDDRY LFLESILSAR DVLYLSYVGQ SIRDNSEQPP SVLVSELLDA IERGFAFSEG EDAISRMVVR HKLQGFNPAY FTERSPLFSY SDDNFRALAC RDERNAGNGS RGRNPVEARP FMDEPLPEAD DGDRRVTIDD LVKFFANPSA FFLDRQLGLK PSAALRPLEE REPFGAEGLD AYMMRQELLA AVLEGGKEEA LLPLFRSRGL LPPARHGELL FGELLAEVRE FADRLPELKG SAAPAVLEAD LDIGGFRLTG RLDHLLPSGQ LLYRCAKMRE KDRIGSWILH LVLGACSPGH MQETRLVMLD RAVRYTPVAD ASGRLETMLS LYRQGLLEPL PFFPRASTAW AGKAEKTERE RIEAALAAWR EGYGGREGEG ADPAFRRCFG TEPPLGERFA AITEEVLLPM LEHGGKG
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