Gene Cpha266_1402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1402 
Symbol 
ID4569311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp1595832 
End bp1599065 
Gene Length3234 bp 
Protein Length1077 aa 
Translation table11 
GC content62% 
IMG OID639765989 
ProductDNA helicase/exodeoxyribonuclease V, gamma subunit 
Protein accessionYP_911855 
Protein GI119357211 
COG category[L] Replication, recombination and repair 
COG ID[COG1330] Exonuclease V gamma subunit 
TIGRFAM ID[TIGR01450] exodeoxyribonuclease V, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.937343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCTGC ATCTCTACAC GGGCAACCGG ATGGAAACGC TTGTCGATGC GCTGGCGGAA 
GTTCTGGGTC GTAACCCGCC ATCTGTTTTC GAATACGAGA AAATAGTGGT GCAGAGCCGC
GGCATGCAGC GGTGGATTTC CATGGAGCTT GCGCGGCGGT TCGGCGTTTG GGCCGGTGCG
GAGTATCCCT TTCCGAACAG GCTGCTGCAG CAGCTCTTCG AGGAGATGGA GCTGACGCAG
CCCGACTCCT CAACGTTTTC GAAAGAGGTG ATGTGCTGGA GTATGATGCG CCTTCTGCCG
GAGATGCTCG ATCGGGAACT GTTTTCGCCC CTGCGATCCT ACCTGCGGAA CGACAGGGAC
GGGCTCAAGC TCTTCCAGCT CTCCGGCCGT ATCGCCGATA CCTTCGACCA GTACACCCTT
TTCCGTACCG ACCTTCTCGC CGCATGGGAA GAGGGGCGGG ACGACGGGGC CCGCGACTGG
CAGCCGGAAT TATGGCGGGC GCTGGTTGCG GAGAGTTCCG GCAAGCATCG TGGCCGTCTG
AAAACGGAGT TCTGCCTCAA GGTTCGGCAC GCGTCGCTTC CGGCTGGATT TCCGAAGCGG
ATTTCGCTCT TCGGCATCTC CTACATGCCG CCCTACCATA TCGGGATGAT CGAAGCCCTG
GCGACGAGGA TACCGGTCAA CATCTTCCTG CTGAGCCCGA CGCAGGAGTA CTGGTCGGAT
ATCGTTTCCC GCAGAAAGCT CTTCCGGATG AGCGAGGGCG AACGGGAACT GAGCACCGAG
GGCAATCCGC TGCTTGCCTC GCTCGGCAGA AGCGGCCGGG AGTTCGCCGA TCTCCTGCTC
GAAGCCGGCG GAATCGAAAA CGAGCACGAC CTCTACATCG AACCCGCCGA CGACACCCTC
CTGCACGCCC TGCAGTCCGA CATGCTCAAC CTGAGCGGAA CGGGGGAGGA GGGGGAGCGC
CGTCCCGCGC CGGAACGCGC CGACCGTTCG GTTCAGGTGC ACTCCTGCCA CAATCCGCTG
CGTGAGGTCG AGGTACTGCA CGACAACCTG CTCGATCTTC TCGAACGCCT ACCCGGTCTG
GAACCGCGGG AGATCGTCGT GATGACGCCC GAGATCGAGA CCTATGCACC CTATATCGCT
ACGGTTTTCG GCTCTTCCGG CGATGGCGTG TCGCGCCTGC CGCATTCGAT AGCCGACCGC
CGCATGCTCG ACGAGGGTGG CATAGCCCCG GCCCTGCTGA AGCTGCTCGA GCTCTACGGC
AGCCGTCTTC CTTCTCCGGA TATTTTCGAT CTGCTCTCTT CGCCGCCGGT GAGCCGACGC
TTCAGGCTTG ACGAAGAGGA ACTCGATACC ATTCGCGTCT GGGTGGCCGA TACGCGAATC
CGCTGGGGTA TGGACGAACG TTCGAGGAGT GGTCTCGGCC TGCCCCCCTT CCGCGATAAC
TCGTGGAGGG CCGGTCTGGA GCGGCTGCTG CTCGGCTATG CCATGCCGGA CGAGGGGGTG
CTTTTCGACG GCGTTCTGCC CTTCGACGTC GAGGGCGATG CGGAAACCCT CGGCAAGTTC
GCCGATTTCA TCGATGCCCT CGAAGCGCTC TCAGCAAGGT TCGATCGGCC CCGAACGCTC
GACGGATGGC GGGATCACTT TATCTGGATG CTTGATATCT TTATCGATGC CGATGAGGAG
GTCGAAAGGG AGCTCTCGCA CATCGCAGCC GAAATCGACA AGCTTACGGA ACTCGCCGGA
GAGGCCAGTT TCGGGGGCGA GACGGCGGCC CCGGTGATGA TCGCCTGGCT GCGCGGCCGT
CTCGAAAAGT TCGAGATGGG GCTTGGCTTC ATGACCGGCG GCATCACCTT CTGCGCCATG
CTGCCGATGC GCAGCATTCC GTTCCGCGTG GTTGCCATGA TCGGCATGAA CGACGGGGCT
TTCCCCCGCC AGCAGCGTCT GCCGGGTTTC GACATGATGT CGAGGGAGCC GCGCAAGGGC
GATCGTTCCG TGCGGGGCGA CGATCGTTAT CTCTTTCTCG AATCAATTCT CTCCGCACGC
GACGTCCTCT ACCTGAGCTA TGTCGGCCAG AGCATCCGGG ATAACAGCGA ACAGCCGCCC
TCCGTGCTGG TGAGCGAACT GCTCGATGCC ATAGAGCGGG GTTTCGCCTT TTCCGAAGGG
GAGGACGCAA TATCGCGCAT GGTTGTGCGG CACAAGCTTC AGGGGTTCAA TCCCGCATAC
TTCACCGAAA GATCGCCACT TTTCAGCTAC TCGGACGATA ACTTCCGGGC GCTTGCATGT
CGCGATGAGC GCAATGCAGG TAATGGGAGC AGGGGGCGAA ATCCGGTCGA AGCCCGCCCC
TTTATGGACG AACCGCTTCC TGAGGCTGAC GACGGGGATC GCCGGGTGAC GATCGACGAT
CTGGTGAAGT TTTTCGCCAA CCCCTCGGCA TTCTTTCTCG ACCGGCAGCT CGGACTGAAA
CCCTCGGCAG CGCTCCGTCC GCTCGAAGAG CGGGAGCCCT TCGGCGCAGA GGGTCTCGAC
GCATATATGA TGCGCCAGGA ACTGCTTGCA GCGGTGCTCG AAGGGGGAAA AGAAGAGGCT
CTCCTGCCCC TGTTTCGGTC GAGAGGGCTC TTGCCGCCGG CCCGACACGG CGAGTTGCTC
TTCGGAGAGC TGCTTGCCGA GGTGAGGGAG TTCGCCGACA GGCTTCCGGA GCTCAAGGGG
AGCGCTGCGC CTGCCGTGCT TGAAGCCGAT CTCGACATCG GGGGATTCCG GCTGACCGGC
AGGCTCGACC ATCTTCTGCC CTCCGGGCAG CTGCTCTATC GCTGCGCGAA GATGCGGGAG
AAGGATCGCA TCGGTTCATG GATTCTGCAC CTCGTGCTCG GTGCGTGCAG TCCGGGTCAT
ATGCAGGAGA CCCGTCTCGT CATGCTCGAC CGTGCCGTCA GGTACACTCC CGTGGCCGAC
GCCTCAGGCA GGCTCGAAAC CATGCTTTCG CTTTACCGGC AGGGGCTCCT GGAGCCGTTG
CCCTTCTTCC CCCGCGCCTC TACGGCCTGG GCCGGCAAGG CGGAAAAGAC GGAGCGCGAG
CGTATCGAAG CCGCCCTGGC TGCATGGCGT GAAGGCTACG GCGGACGCGA AGGCGAGGGT
GCCGATCCGG CCTTCCGCCG CTGTTTCGGC ACGGAGCCGC CCCTCGGCGA GCGCTTTGCA
GCCATTACCG AAGAGGTGTT ATTGCCGATG CTTGAACACG GAGGCAAGGG ATGA
 
Protein sequence
MTLHLYTGNR METLVDALAE VLGRNPPSVF EYEKIVVQSR GMQRWISMEL ARRFGVWAGA 
EYPFPNRLLQ QLFEEMELTQ PDSSTFSKEV MCWSMMRLLP EMLDRELFSP LRSYLRNDRD
GLKLFQLSGR IADTFDQYTL FRTDLLAAWE EGRDDGARDW QPELWRALVA ESSGKHRGRL
KTEFCLKVRH ASLPAGFPKR ISLFGISYMP PYHIGMIEAL ATRIPVNIFL LSPTQEYWSD
IVSRRKLFRM SEGERELSTE GNPLLASLGR SGREFADLLL EAGGIENEHD LYIEPADDTL
LHALQSDMLN LSGTGEEGER RPAPERADRS VQVHSCHNPL REVEVLHDNL LDLLERLPGL
EPREIVVMTP EIETYAPYIA TVFGSSGDGV SRLPHSIADR RMLDEGGIAP ALLKLLELYG
SRLPSPDIFD LLSSPPVSRR FRLDEEELDT IRVWVADTRI RWGMDERSRS GLGLPPFRDN
SWRAGLERLL LGYAMPDEGV LFDGVLPFDV EGDAETLGKF ADFIDALEAL SARFDRPRTL
DGWRDHFIWM LDIFIDADEE VERELSHIAA EIDKLTELAG EASFGGETAA PVMIAWLRGR
LEKFEMGLGF MTGGITFCAM LPMRSIPFRV VAMIGMNDGA FPRQQRLPGF DMMSREPRKG
DRSVRGDDRY LFLESILSAR DVLYLSYVGQ SIRDNSEQPP SVLVSELLDA IERGFAFSEG
EDAISRMVVR HKLQGFNPAY FTERSPLFSY SDDNFRALAC RDERNAGNGS RGRNPVEARP
FMDEPLPEAD DGDRRVTIDD LVKFFANPSA FFLDRQLGLK PSAALRPLEE REPFGAEGLD
AYMMRQELLA AVLEGGKEEA LLPLFRSRGL LPPARHGELL FGELLAEVRE FADRLPELKG
SAAPAVLEAD LDIGGFRLTG RLDHLLPSGQ LLYRCAKMRE KDRIGSWILH LVLGACSPGH
MQETRLVMLD RAVRYTPVAD ASGRLETMLS LYRQGLLEPL PFFPRASTAW AGKAEKTERE
RIEAALAAWR EGYGGREGEG ADPAFRRCFG TEPPLGERFA AITEEVLLPM LEHGGKG