| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1401 |
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| Symbol | |
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| ID | 4569310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | - |
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| Start bp | 1592170 |
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| End bp | 1595835 |
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| Gene Length | 3666 bp |
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| Protein Length | 1221 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639765988 |
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| Product | DNA helicase/exodeoxyribonuclease V, beta subunit |
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| Protein accession | YP_911854 |
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| Protein GI | 119357210 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATAC GCATTCTCGA TCACTCCTCG GTTGCCCTTT CGGGCATGAA CCTCATCGAG
GCGAGTGCCG GAACGGGCAA AACCTGGGCA ATCACCTCGC TCTACCTTCG CCTGCTGCTT
GAGAAGGAGC TGCGGCCCGA ACAGATTCTT GTGGTTACCT ATACCGAAGC CGCCACCAGG
GAGCTGCATG CGCGCATTCG CCGCCGCATC CGCCAGGCGC TCGATGCCAT GCGCGGAGAT
CCGACGGACG ACGCATTCCT TGTCGGCCTG TGCGAGCGAG CTGCAGAAGC AGGGGAGGAG
GAGCGGGCCG CCCTGCTGCT TGAAGCCGCC CTGGCAGAGT TCGACACCGC CTCCATCTTC
ACCATACACG GCTTCTGCAA TCGCGCCCTG CAGGATCACG CCTTCGAAAG CGGAGCGCTC
TACGACACCG AGCTTGTCAC CGACCAGTCG GCGCTTGCGC GGGAGGTGAT CGACGATTTC
TGGCGTGAAC GCTTTTTCGG CAGTGCCGAC CAGTTGCTCG GCTACGCGCT GCTCAAGGGG
TGGTCTCCGG ACGCCTTCAT GGCCTTCCTG AAATCCCTGC AGCTTTCGGG GCGTGACGAG
GTGATCCCGG TCTATGGCGA GGCGGAAATC GCCCGGATCG GGCATGAAGC CGAGGCGGCT
TTCGACGAGG TGCGCCGCAT CTGGAGCGAA GAAAAGGCGC CGGTTTCGAC GCTTCTTCGT
ACAGGCAAGG CGCTCAGCCG CTCCGAAAAG GCCTACCGGG CGGACAGGGT GGAGCAGTTG
CTCTCCGACA TGGAGGTTTT CGTCGCTGCC GAAAACCCCT TCGGCCTTTT CGACGGCTTC
GACAAGCTCA CCACTTCAGG CATCGCAGCC GGCACCAAAT CCTCCGGCAC CCCGCCTTCG
CATCCGCTTT TCGACGCCTG CGAACGGCTG CAGGCGGCCG CTGACGAGCG GTTGCTGGCC
CTGAAATCGG AGGTGGTGGC GTTTTACCGC AAGCGACTGC CGGAGCGCAA GAAAGAGCGC
AACATCCGTT TTTTCGACGA CCTGCTTGCC GACCTTTATC AGGCACTTCA AGGCGGATAT
GAATCCGCCG CGATTATACA AGGCGGGGCA GAATCAGTAG CGATTTCAGG TGGTGCCGAA
TCCGCAGCTG CTCTTGCCGA AGCGCTTCGC AAGCGCTACC GCGCAGCCCT GATCGACGAA
TTCCAGGACA CCGATCCGGT GCAGTACGAC ATTTTCCGGC GCATCTACGC TGGTTCCGAG
GCGCCGCTCT TCCTCATCGG TGATCCCAAG CAGGCGATCT ACAGTTTTCG TGGAGCCGAC
ATTTTCGCCT ATATGCAGGC CGCCAGCGAC GTCGGCCGGG AGCGCAGCTT CACGCTCAAC
ACAAACTGGC GTTCGGTGCC GAAACTGCTT GACGCTTTCA ACCTGCTTTT CGACAGCGCG
CGTCACCCCT TCGTGTTCGA CAATATACCT TCGCCGCCGC TCGTGGCGGG AAAGGGACTG
CCCCGGGATG CCGAATCTCC GGTGTCGCCG CTTGAAATCT GCCTCCTCCG ATCCGGCGAC
GGCGACGGCA GTCTGAAGAG CGGAGAGTCC GAACGGTTCG CTGCCGGAGC CTGCGCATCC
ATGGTTACGG AAACCATCAA CGGAGGCTCC GATGCGGGCG ACATTGCCGT GATCGTGCGC
ACCCACCGGC AGGCCCGCAT GATGCAGGCC GCACTCCGGG AGTGCGGCAT CGTCTCCGTC
ATGCGCAGCG ACGAAAGCGT CTTCGCCTCC GTCGAAGCCG AGGAGGTGCG CATTCTCGTG
ACGGCGCTCG CCGAACCGGG CCGCGAGTCG CTCGTACGTG CCGCCCTCGT CACGCCGCTT
TTCGGACTGA ACGGCAGCGA CATCGCTCGC CTCAACGACG ACGAAAACGC CTGGGTGGAG
CGGTTGCAGC AGTTCCGCGA GTACCACCGT CTCTGGCAGG AGCGCGGCTT CATGCTCATG
GTGCGCGAAC TGATGCGCCA CGAAGCCGTG CGCGAGCGCC TGCTGGCCCT TTCCGGATCG
TCCGGCGAGC GCGCCCTGAC CAACGTGCTG CACTGCTTCG AGCTGCTGCA CCGTGAGGCG
CACAGCCGGG GGCTCGGCAT GGAGGGGCTG GTTACCTGGT TCGGCGAACG GGTGGCGGCC
AGGGAGCCCG GCGAGGAGTA CCAGATCCGG CTCGAAAGTG ACGAGCCGGC CGTCCGGATC
GTCACCGCCC ATGTGAGCAA GGGGCTGCAG TACCCGATTG TATTCTGTCC CTTCCAGTTC
GGAGGAGCTG GCAGCGGAGG GGATGTGGTG CTGTTTCATG ACGACGACGG ACGGATGAAA
AGGGATTTCG GGTCGCGGGC GATAGAGCAC CACCGGGCGC TGGCCTCGCG CGAATCCCTC
GCCGAAAACC TGCGCCTTTT CTACGTCGCC CTGACGAGGG CCGAACGGCG CTGTATTTTT
TTCACCGCAC GGATCGTCGA TGGACGCCAG TCCGGCCGTA CCCCGATGCT CTCGCCCTCT
TCCTATCTGC TTTACGTTTC GGACGAGGCA AGGCAGAGTC CCAGGGTGAT CGGAGAGGCG
CAGCATGAGC TTGCCGCGCT CGATGCCGGG GAGATGGCGG AACGGCTTCA GAGTATGTCG
GACGAATCGG GCGGAGCGAT CCGGCTCAGG CCTCTCTCCC TCGACGACGA TCTTACGCTG
CCCCTCGTTC GAACCGCAGC GGCCGCTTCT CCTTCGTTCG TGCTTCGGGA GTTTACAGCG
AGCATCGAAA CCGACTGGCG GATCGCGAGT TTCACCACCC TCAGCCGCCA CCGTCACATG
GCCTTCGAGC TGCCCGACCG CGACGAAAGC GCTCCGGAGC AGCAGGCGGC CGCCGCTCCG
GCTGTGCTGC CCGACACGGA TCGCTCCATC TTCGCCTTCC CGAAAGGAGC CGGAGCGGGC
ATCCTCATGC ACTCGATCTT TGAAACGCTC GATTTCGCTT TCGCTACCGA AAGCGTTATC
GACGAGGCTT CCGTCAGGGC GCTCGACCGC TATGGATACG ACCGCCACTG GCAGCCCTGC
CTGACCGGGA TGGTGCGGCA GGTTCTCTCG ACGCCGCTCT CCTCGCCGGA GGGGAGCTTC
ACTCTCGGCG GACTGCGGCA GGGGAGCTGG AGCACCGAGC TGGAGTTCTT CTTTCCTCTC
AGGCACGTCA CCTCACCCCG GCTTTCGGAA CTGCTCATGA GGCACGGCGT CATTCCAAAC
GGTGCCGATC CCGCTGCCGC CCTGCAGGCG CTCGATTTTA CGCCGGTCAA GGGGATGCTG
ATGGGATTCA TGGACATGGT GTTCGAAGCA GAGGGGCGCT ACTATCTGCT CGACTGGAAA
TCGAACCACC TCGGCAACGC CGTCGAAGCG TACCATCGGG ACCATCTCGG CAAGGCGATG
CAGGAGAACC TCTACCGGCT GCAGTACCTG CTCTACACGG TGGCACTCGA CCGCTTTCTC
TCGCTGCGGG TGCCGGGCTA CCGCTACGAG ACACACTTCG GCGGTGCGAT CTACGTTTTT
CTGCGCGGCG TCAGCGCCGA ACGGGGCGAG GAGTACGGCT TCTTCCGCGA CCTGCCTCCG
GAAGCGCTGA TCCGCGAGCT GCAGGAGCTG CTGATCGAAA CGGAAACAGG GGAGAGCGAA
GCATGA
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| Protein sequence | MTIRILDHSS VALSGMNLIE ASAGTGKTWA ITSLYLRLLL EKELRPEQIL VVTYTEAATR
ELHARIRRRI RQALDAMRGD PTDDAFLVGL CERAAEAGEE ERAALLLEAA LAEFDTASIF
TIHGFCNRAL QDHAFESGAL YDTELVTDQS ALAREVIDDF WRERFFGSAD QLLGYALLKG
WSPDAFMAFL KSLQLSGRDE VIPVYGEAEI ARIGHEAEAA FDEVRRIWSE EKAPVSTLLR
TGKALSRSEK AYRADRVEQL LSDMEVFVAA ENPFGLFDGF DKLTTSGIAA GTKSSGTPPS
HPLFDACERL QAAADERLLA LKSEVVAFYR KRLPERKKER NIRFFDDLLA DLYQALQGGY
ESAAIIQGGA ESVAISGGAE SAAALAEALR KRYRAALIDE FQDTDPVQYD IFRRIYAGSE
APLFLIGDPK QAIYSFRGAD IFAYMQAASD VGRERSFTLN TNWRSVPKLL DAFNLLFDSA
RHPFVFDNIP SPPLVAGKGL PRDAESPVSP LEICLLRSGD GDGSLKSGES ERFAAGACAS
MVTETINGGS DAGDIAVIVR THRQARMMQA ALRECGIVSV MRSDESVFAS VEAEEVRILV
TALAEPGRES LVRAALVTPL FGLNGSDIAR LNDDENAWVE RLQQFREYHR LWQERGFMLM
VRELMRHEAV RERLLALSGS SGERALTNVL HCFELLHREA HSRGLGMEGL VTWFGERVAA
REPGEEYQIR LESDEPAVRI VTAHVSKGLQ YPIVFCPFQF GGAGSGGDVV LFHDDDGRMK
RDFGSRAIEH HRALASRESL AENLRLFYVA LTRAERRCIF FTARIVDGRQ SGRTPMLSPS
SYLLYVSDEA RQSPRVIGEA QHELAALDAG EMAERLQSMS DESGGAIRLR PLSLDDDLTL
PLVRTAAAAS PSFVLREFTA SIETDWRIAS FTTLSRHRHM AFELPDRDES APEQQAAAAP
AVLPDTDRSI FAFPKGAGAG ILMHSIFETL DFAFATESVI DEASVRALDR YGYDRHWQPC
LTGMVRQVLS TPLSSPEGSF TLGGLRQGSW STELEFFFPL RHVTSPRLSE LLMRHGVIPN
GADPAAALQA LDFTPVKGML MGFMDMVFEA EGRYYLLDWK SNHLGNAVEA YHRDHLGKAM
QENLYRLQYL LYTVALDRFL SLRVPGYRYE THFGGAIYVF LRGVSAERGE EYGFFRDLPP
EALIRELQEL LIETETGESE A
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