| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1354 |
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| Symbol | |
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| ID | 4569553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | - |
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| Start bp | 1547991 |
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| End bp | 1551665 |
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| Gene Length | 3675 bp |
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| Protein Length | 1224 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639765943 |
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| Product | SMC domain-containing protein |
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| Protein accession | YP_911809 |
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| Protein GI | 119357165 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTC TCTCCTTGCG ATTCAAAAAT CTGAACTCTC TTGTCGGTGA GTGGTTTATC
GATTTTTCAG CTCCGGAGTA TGTCTCCGAC GGGATATTTG CCATTACCGG GCCAACCGGT
TCGGGCAAAA GCACCATTCT CGATGCGATT TCGCTTGCCC TGTATGGGCA GACTCCCCGG
CTTGAAAAGG TCAATTCGAG CACCAATGAG ATTATGTCGC GTCATACGGG GGAGTGTTTT
GCCGAGGTGG TGTTTGAAAC AGGAACAGGC AGGTTCCGGT GCCACTGGGC GCAGCACCGA
GCCCGCAGAC ATCCGCTTGG GATATTGCAG GCCCAGAAGC ATGAAATTGC CGATGCTCTG
ACCGGAAGAG TGATTGAAAC GAAACTGCAG GATACCCTTC AGGCGGTGGT GGAACGGACA
GGGATGGATT TTGATCAGTT CACCCGTTCC ATGCTTCTTG CTCAGGGGGG GTTTGCTGTT
TTTCTTCAGT CTCCACCGGA CGAACGGGCT CCGGTACTTG AACAGATAAC CGGTACGGCG
ATCTATTCGG CAATATCTGT CAAGGTACAT GAGCGAAATC GCGCTGAGCA GCAGGAACTT
GAAACGCTCA GGGTCGAGTG CTCCGGCATC ATCCTGCTCG ATGATGATGC GCTTCAGGCG
GCGAAAGCGG AGCTTCAGGC AAAGCTTGAT GAAGAGGCAG GAATAATCAA TCGGCAAAGC
GAAGCTGAAG CCTCATTGCG ATGGCTTCGT CAGATTCTTG TGATGAAGGG TGAGCTTGCC
GATATGGAGA GCGATTTTGA AAAGCTTGAG CTCAGTGATA GAGATTTTTC TGGTGATCGC
GAACGGATGG AACTGGCCCG TCGGGCAGCA GGGTTTGAAC CGGCTTATAT GATCATCCGT
CAGCAGCAGG AGTTGCAGGA TCGGGAATTG CGGGAGAAAT CAGGCGCTGA ACATGAACTG
GAACGTTTGA ATACGGATTT TACGGAACAT ACAGAGCGAT TTCGCGAAGC TGAGCAGAAG
CTGGAGATTT TCAAAGGGCA GGAGAAAGAG CTTTCAATGG TTGTTCGAGA GGTCAGAGCG
CTCGACATTC GTATATCAGG AAAGAGGGAG CAATGCGATG AAATGGCTGC TGAAATAAAG
GCGCTTTGTG AAAGAATTTC AGCGTCGGAT AGCATCATTT GCGGCATAAA GAGGGAGATG
GAGCAGGAGA GGACGGAGGC TGAAGATTCC GAAAGCTATC TTGCCGAACA TGGAACCGAC
AGCAGACTTG CCGCTTCGCT GAGCGGCATT GAAGCATTGG TTCTTCAGTA TGAAGAAGCG
CAGGCAGAAG AGCGTGATGC GGGAGTCTTG CTTGCAGAGA GGCACAAATT GTTCGAAAAC
GCCAAAACGC TTCTTCTGAA TTTCCAGCCT GAAACCGTAA GGGCAGGAGA GGCTTTCGAT
CAATCCCGTT TCCGATGGGA GGAGCTTTCG GCGACTCTTG CATCGCTGCT TCAGGGAACG
GATATATCGA ACCTTCGCAT GGCAGTGCAG GAGCTTGAAG AGCGTTCAAG AAACCTTGAA
ATCCTTTCTG TTCGAATTGC AGCCATGGCA GAGCGGGAAA AGCGTATCGT AACGCTCCGG
GAAACTCTTC CGGCGATTGA TAGTGTGCAA TCGCGAGTGG CGGAAGAGAT AGACAGGCTT
GTTCTGCTTC AGGAGAAGGC AGAACAGGTT GTCGAAGCTC TTCAACGAGA GGCGGAACTG
TATCTGAAAA TCCGGTCGCT CGAGGATGAG CGAAAAGTGT TGCTATACGG TTCGCCTTGC
CCTCTCTGCG GATCACGTCA TCACCCCTGG GCTGACGGAG CCGTTCCTGA ACCCTCCGCC
GAGGGCGAGG AACTTCAACA TGCCAAAGCA TCGGTGCTGG AAATTTCCGA AAAGATTACG
GCATTGCGGA TTGAGGCTGC CGGCGCAATA AAGGACAGGG CGCACAACGA AGAGCAGATC
GCCGAGTTAC GGATACTTCT TTCTGGAGAA GATGCTGTTT GCCGGAATCT CGCCGTTCAG
CTTGAGATTG CCGGTGACTT GAACGCCGAA CAGGTTTTGC GGCTTCTTTC AGAAGCTCAT
TGCGCAGCGG AAAAAGAGGC GGAGAGGCTT GGAAAGGCCA TTCTCCTTGA AAAGCAATTG
CTCTTTTCTG AATCGGAGGC GCAGCGGCTG CATCGTCTTT TCACGGAAGC TGTACGAGCG
GAGGAGAAGG CCGAATATGA GGTGAAGACT GCAGGGATGG AGGTTGAGAG AGCTATGGAT
GTTCAACGAA AAATTCAGGA AAGGAAAGCC GCAATTCGGG AGAGTCTCAA CAGGGAGTAT
GACGGATATG GTATCGTTCC ACAAGCGGCT CGCTCTTGCC GTGACGTCCT GCTTATTCTG
CATTCTCGGC TTGAACGGTG GCATAGGGCA AACGAGCGCA GAACCTCGGC CTATCAGCGC
ATCGCCATTT TGGAAGGGAA TCTCAAGATG CAAGAGGAGA TGCTTATGAC GAGAAAAGGG
GAGCACGCAG AAAAAGAGAA GCTCCTTGCA GCCTGTACTG CTGAGTTTAC AACGCTCAAT
GAGCTTCGGA TAGCCCGGTT TGGAGAAAAA AATCCTGATG AGGAGGAACA TCGTCTCGCC
ATCATGCTCA AATGTTCCGA AGTTGATCTT GATGGTGCCC GACGCACGTG TGAAGCGGCT
TCAACGCAGA TTCTTCAACT TTCGACAAGG ATTGCCATGC TTGCCTCCTC ATTAACGGAA
AGGGCCATGA AGATCAGGGA GAAAGAGGCG CTTTTTCTTC AGGAACTGAG CGAGAGCGGA
TTTGATGGCA TGGGCGGGTT TGTTTCATCA CGGCTTGATC GTGAGGAACT CGAACAGCTT
GAACAGCAGG CTAAGGATCT TGCCGCTCGT CGGCTTGAAC TCGAAACATT GCGGGGAGAA
CGACAGTACA AACTGAGAAT GGAGGAGGAT AGAGCCCTTA CCGAGAATTC CCCTGAAGAG
CTGCAGGAAG AGCTGGATGC GCTTTTCGGA AGGCTCGATA TTGTCCGTTC GGATACTGCG
TCAGTAAAAC TTCATCTGTA TGAACATGAA CAGGCCGCGG TGATGCTTCG CGAAAAAACG
ATAGCCCTTG TTGCCCGGCA GATTGAGTGT TCAAGGTGGT CGCTTTTGCA CGAGCTTATC
GGTTCTTCCG ACGGAAAGAA GTTTCGCAAT TTCGCCCAGG GGCTGACCTT TGAGATCATG
GTTCACCATG CCAACCGACA GCTTATGAAT ATGACTGACC GTTATCTTCT TGTTCGTGAC
GTACAGCGTC CTCTTGAACT TAATGTGATC GATAACTATC AGGGGGGGGA GATACGATCG
ACCAAAAACC TTTCCGGCGG CGAAAGCTTT CTTGTCAGTC TTGCTCTTGC GCTCGGTCTT
TCACAGATGT CAAGCCGAAA TGTGAGTGTT GATTCGCTTT TTCTGGACGA GGGGTTTGGT
ACTCTGGATG AAGATGCGCT GGAAACAGCG CTGCAAACTC TTGCCGGATT GCATGAGAGC
GGAAAGCTTA TTGGCATTAT TTCTCATGTT CCGGTACTCA GGGAGAGAAT CGGCACCCGT
ATTGAGGTGA AACCTCTTAA CGGAGGCCGG AGCATGGTTT CCGGCCCTGG AGTTTCCGTG
GTAAATGAGG GGTGA
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| Protein sequence | MKILSLRFKN LNSLVGEWFI DFSAPEYVSD GIFAITGPTG SGKSTILDAI SLALYGQTPR
LEKVNSSTNE IMSRHTGECF AEVVFETGTG RFRCHWAQHR ARRHPLGILQ AQKHEIADAL
TGRVIETKLQ DTLQAVVERT GMDFDQFTRS MLLAQGGFAV FLQSPPDERA PVLEQITGTA
IYSAISVKVH ERNRAEQQEL ETLRVECSGI ILLDDDALQA AKAELQAKLD EEAGIINRQS
EAEASLRWLR QILVMKGELA DMESDFEKLE LSDRDFSGDR ERMELARRAA GFEPAYMIIR
QQQELQDREL REKSGAEHEL ERLNTDFTEH TERFREAEQK LEIFKGQEKE LSMVVREVRA
LDIRISGKRE QCDEMAAEIK ALCERISASD SIICGIKREM EQERTEAEDS ESYLAEHGTD
SRLAASLSGI EALVLQYEEA QAEERDAGVL LAERHKLFEN AKTLLLNFQP ETVRAGEAFD
QSRFRWEELS ATLASLLQGT DISNLRMAVQ ELEERSRNLE ILSVRIAAMA EREKRIVTLR
ETLPAIDSVQ SRVAEEIDRL VLLQEKAEQV VEALQREAEL YLKIRSLEDE RKVLLYGSPC
PLCGSRHHPW ADGAVPEPSA EGEELQHAKA SVLEISEKIT ALRIEAAGAI KDRAHNEEQI
AELRILLSGE DAVCRNLAVQ LEIAGDLNAE QVLRLLSEAH CAAEKEAERL GKAILLEKQL
LFSESEAQRL HRLFTEAVRA EEKAEYEVKT AGMEVERAMD VQRKIQERKA AIRESLNREY
DGYGIVPQAA RSCRDVLLIL HSRLERWHRA NERRTSAYQR IAILEGNLKM QEEMLMTRKG
EHAEKEKLLA ACTAEFTTLN ELRIARFGEK NPDEEEHRLA IMLKCSEVDL DGARRTCEAA
STQILQLSTR IAMLASSLTE RAMKIREKEA LFLQELSESG FDGMGGFVSS RLDREELEQL
EQQAKDLAAR RLELETLRGE RQYKLRMEED RALTENSPEE LQEELDALFG RLDIVRSDTA
SVKLHLYEHE QAAVMLREKT IALVARQIEC SRWSLLHELI GSSDGKKFRN FAQGLTFEIM
VHHANRQLMN MTDRYLLVRD VQRPLELNVI DNYQGGEIRS TKNLSGGESF LVSLALALGL
SQMSSRNVSV DSLFLDEGFG TLDEDALETA LQTLAGLHES GKLIGIISHV PVLRERIGTR
IEVKPLNGGR SMVSGPGVSV VNEG
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