Gene Cpha266_1328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1328 
Symbol 
ID4570906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp1521787 
End bp1523871 
Gene Length2085 bp 
Protein Length694 aa 
Translation table11 
GC content49% 
IMG OID639765917 
ProductC-terminal processing peptidase-1 
Protein accessionYP_911783 
Protein GI119357139 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0793] Periplasmic protease 
TIGRFAM ID[TIGR00225] C-terminal peptidase (prc) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0242336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGCC TCGCATCAAT ATTGTCAAGA AACGGATTTC TTGTTCTCAT TCTTTCTTTT 
CTCTTTTCCT GCCCGGCACT TGCAGTAATC AAGAAACCGG CTGCTGCCGG CGCCAATGCG
AAAGCGACTT CCTCTGCAGC GGTTACGCTT AAAGCCTCGC CTGTCCAGGA TGAAGCCACA
GGATATATCG CCCAGTATCT GATGCAGAAC CATTACAGAA AGGTGGCGGT TAACGACTCG
CTTTCAAGGG AGATTTTCAA CCGATACCTT GAGCATCTCG ATGCAGGCAA GAGTTATTTT
ATTGCCAGTG AGGTCGAGAG CATGAGACAG TATTATGGTA CGCGTTTCGA CAATGAGTTT
CTGACGGGAA AAAGCACATC CGGTTTTGCT GTCTACAATT TCTTTTTGAA AAGAGCCAGG
GAGAAAATGC GTTTCATGAA AGCGGTTGCC GATACCGCTC AATTTGATTT CTCCAGACCC
GAAACGCTGA ATCTCGATCG CAAGAGCGAT ACCTGGCCGC TTGACCGTAA TGAACTCTAT
GCGATCTGGA GAAAAGAGCT GAAATATCAG TGGCTTAATC TCAAATACGG GGCCGAAAAA
GAGTCATCGA TACGTACAGC TCTTTCAAAA CGATACGCCA ACCGGTTGAA ACTGCTTAAC
CTTCAGAAAA GCGACGATGC TTTTCAGGCA TACATGTTTG CGGTTACCAC CTCCTTTGAT
CCGCATACAA ACTATTTTTC GCCCGATGAA TTCGAGAACT TCCAGATCGA TTTAAGTCGC
TCACTTGAAG GCATCGGAGC CAAATTGCAG ATGGAAAGTG ATTTTACGGT TGTTAACGAG
ATCATTCCCG GGGGGCCGGC CTTTAAAAGC TCTCTTTTGA AAAAATCCGA CAGGATTATC
GGCGTTGGAC AGGGGAGAAC TTCTGAAATT GTGGATGTGA CAGGATGGCG TCTCAATGAT
GTTGTCAAAA AGATCCGCGG ACCGAAAGGC ACCTATGTAC GGTTGAAAAT CCTTCCGGCA
AGCCAGGCGG GGAGAGGCCC GGCAAAGATC GTTCAGCTTG TTCGCGATAA AATCAATCTT
GACGAACAGG CCGCGCAAAA GAGAATCATG ACGCTCAATA ACGAAAAAAT CGGCGTGATT
ACCATTCCGT CCTTTTATCT TGATTTTGAA GCGCAGAAAC GCCATGCCGG CAGGTATAAC
AGTACAAGTC GGGATGTGGC AAGGATAATC GGCGAGCTCA AGGCACAAAA AGTTCAGGGT
ATCATTATCG ATCTCAGGGA TAACGGAGGG GGATCGCTCG AGGAGGCTGT CAATGTGACC
GGTCTGTTTA TTTCCAATGG ACCGGTCGTT CAGGTCAGCA ACTCCTCAGG TGGTAAAATG
GTACTCAGGG ATGAAGACAA CCGGGTGTTG TTTGACGGCC CGATTGCTGT TCTGGTTAAC
CGGTACAGCG CTTCGGCATC TGAAATTTTT GCTGCGGCAA TTCAGGATTA CGGCAGGGGA
GTCATCATCG GAGAGCGAAC CTTTGGCAAA GGAACAGTCC AGAGCATTGT AAAGCTCACC
CGTCCATTCA GCTTTTTTGC CAACAAGGCC GAACTTGGCC AGATGAAACT GACCATCGCC
AAATTTTATC GGATATCCGG TGAAAGCACC CAGCACAAGG GCGTTGTGCC GGACATCGGC
ATCTCGTCGC TGATCGACAC CTCATCTGTC GGAGAAGATA CCTATACGAG CAGTTTGCCC
TGGAGCACTA TTTCAAAAGC ACTCTATACT CCTCTGGGCA CAACGGGTAA AATCAGTACG
GGACGTCTGC TGCAGCAGTA CAAGGCTCGC TCATCCAGCC AGAAGGTTTA CCAGGATTAC
ATGCGCGACC TTGCTTCTCT CAATGCCATT CGCAAAAAGA AGGTCGTTTC CCTTAACGAA
AAAACATTCA AGACCGAAAG CGAGCGCCTG AAGCAGATCG AGCAGTCATG GGCGGTTGAG
CAGGATGGCG TTAAAAATCC TTCAAAGGAT TTCATGCTGA ACAGATCTGC CGAAATCATG
TCCGACATGA TCCCGCCTGA CAGCGGATCG CAGGCATTGA AGTAA
 
Protein sequence
MARLASILSR NGFLVLILSF LFSCPALAVI KKPAAAGANA KATSSAAVTL KASPVQDEAT 
GYIAQYLMQN HYRKVAVNDS LSREIFNRYL EHLDAGKSYF IASEVESMRQ YYGTRFDNEF
LTGKSTSGFA VYNFFLKRAR EKMRFMKAVA DTAQFDFSRP ETLNLDRKSD TWPLDRNELY
AIWRKELKYQ WLNLKYGAEK ESSIRTALSK RYANRLKLLN LQKSDDAFQA YMFAVTTSFD
PHTNYFSPDE FENFQIDLSR SLEGIGAKLQ MESDFTVVNE IIPGGPAFKS SLLKKSDRII
GVGQGRTSEI VDVTGWRLND VVKKIRGPKG TYVRLKILPA SQAGRGPAKI VQLVRDKINL
DEQAAQKRIM TLNNEKIGVI TIPSFYLDFE AQKRHAGRYN STSRDVARII GELKAQKVQG
IIIDLRDNGG GSLEEAVNVT GLFISNGPVV QVSNSSGGKM VLRDEDNRVL FDGPIAVLVN
RYSASASEIF AAAIQDYGRG VIIGERTFGK GTVQSIVKLT RPFSFFANKA ELGQMKLTIA
KFYRISGEST QHKGVVPDIG ISSLIDTSSV GEDTYTSSLP WSTISKALYT PLGTTGKIST
GRLLQQYKAR SSSQKVYQDY MRDLASLNAI RKKKVVSLNE KTFKTESERL KQIEQSWAVE
QDGVKNPSKD FMLNRSAEIM SDMIPPDSGS QALK