Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_1328 |
Symbol | |
ID | 4570906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 1521787 |
End bp | 1523871 |
Gene Length | 2085 bp |
Protein Length | 694 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639765917 |
Product | C-terminal processing peptidase-1 |
Protein accession | YP_911783 |
Protein GI | 119357139 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0242336 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCGCC TCGCATCAAT ATTGTCAAGA AACGGATTTC TTGTTCTCAT TCTTTCTTTT CTCTTTTCCT GCCCGGCACT TGCAGTAATC AAGAAACCGG CTGCTGCCGG CGCCAATGCG AAAGCGACTT CCTCTGCAGC GGTTACGCTT AAAGCCTCGC CTGTCCAGGA TGAAGCCACA GGATATATCG CCCAGTATCT GATGCAGAAC CATTACAGAA AGGTGGCGGT TAACGACTCG CTTTCAAGGG AGATTTTCAA CCGATACCTT GAGCATCTCG ATGCAGGCAA GAGTTATTTT ATTGCCAGTG AGGTCGAGAG CATGAGACAG TATTATGGTA CGCGTTTCGA CAATGAGTTT CTGACGGGAA AAAGCACATC CGGTTTTGCT GTCTACAATT TCTTTTTGAA AAGAGCCAGG GAGAAAATGC GTTTCATGAA AGCGGTTGCC GATACCGCTC AATTTGATTT CTCCAGACCC GAAACGCTGA ATCTCGATCG CAAGAGCGAT ACCTGGCCGC TTGACCGTAA TGAACTCTAT GCGATCTGGA GAAAAGAGCT GAAATATCAG TGGCTTAATC TCAAATACGG GGCCGAAAAA GAGTCATCGA TACGTACAGC TCTTTCAAAA CGATACGCCA ACCGGTTGAA ACTGCTTAAC CTTCAGAAAA GCGACGATGC TTTTCAGGCA TACATGTTTG CGGTTACCAC CTCCTTTGAT CCGCATACAA ACTATTTTTC GCCCGATGAA TTCGAGAACT TCCAGATCGA TTTAAGTCGC TCACTTGAAG GCATCGGAGC CAAATTGCAG ATGGAAAGTG ATTTTACGGT TGTTAACGAG ATCATTCCCG GGGGGCCGGC CTTTAAAAGC TCTCTTTTGA AAAAATCCGA CAGGATTATC GGCGTTGGAC AGGGGAGAAC TTCTGAAATT GTGGATGTGA CAGGATGGCG TCTCAATGAT GTTGTCAAAA AGATCCGCGG ACCGAAAGGC ACCTATGTAC GGTTGAAAAT CCTTCCGGCA AGCCAGGCGG GGAGAGGCCC GGCAAAGATC GTTCAGCTTG TTCGCGATAA AATCAATCTT GACGAACAGG CCGCGCAAAA GAGAATCATG ACGCTCAATA ACGAAAAAAT CGGCGTGATT ACCATTCCGT CCTTTTATCT TGATTTTGAA GCGCAGAAAC GCCATGCCGG CAGGTATAAC AGTACAAGTC GGGATGTGGC AAGGATAATC GGCGAGCTCA AGGCACAAAA AGTTCAGGGT ATCATTATCG ATCTCAGGGA TAACGGAGGG GGATCGCTCG AGGAGGCTGT CAATGTGACC GGTCTGTTTA TTTCCAATGG ACCGGTCGTT CAGGTCAGCA ACTCCTCAGG TGGTAAAATG GTACTCAGGG ATGAAGACAA CCGGGTGTTG TTTGACGGCC CGATTGCTGT TCTGGTTAAC CGGTACAGCG CTTCGGCATC TGAAATTTTT GCTGCGGCAA TTCAGGATTA CGGCAGGGGA GTCATCATCG GAGAGCGAAC CTTTGGCAAA GGAACAGTCC AGAGCATTGT AAAGCTCACC CGTCCATTCA GCTTTTTTGC CAACAAGGCC GAACTTGGCC AGATGAAACT GACCATCGCC AAATTTTATC GGATATCCGG TGAAAGCACC CAGCACAAGG GCGTTGTGCC GGACATCGGC ATCTCGTCGC TGATCGACAC CTCATCTGTC GGAGAAGATA CCTATACGAG CAGTTTGCCC TGGAGCACTA TTTCAAAAGC ACTCTATACT CCTCTGGGCA CAACGGGTAA AATCAGTACG GGACGTCTGC TGCAGCAGTA CAAGGCTCGC TCATCCAGCC AGAAGGTTTA CCAGGATTAC ATGCGCGACC TTGCTTCTCT CAATGCCATT CGCAAAAAGA AGGTCGTTTC CCTTAACGAA AAAACATTCA AGACCGAAAG CGAGCGCCTG AAGCAGATCG AGCAGTCATG GGCGGTTGAG CAGGATGGCG TTAAAAATCC TTCAAAGGAT TTCATGCTGA ACAGATCTGC CGAAATCATG TCCGACATGA TCCCGCCTGA CAGCGGATCG CAGGCATTGA AGTAA
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Protein sequence | MARLASILSR NGFLVLILSF LFSCPALAVI KKPAAAGANA KATSSAAVTL KASPVQDEAT GYIAQYLMQN HYRKVAVNDS LSREIFNRYL EHLDAGKSYF IASEVESMRQ YYGTRFDNEF LTGKSTSGFA VYNFFLKRAR EKMRFMKAVA DTAQFDFSRP ETLNLDRKSD TWPLDRNELY AIWRKELKYQ WLNLKYGAEK ESSIRTALSK RYANRLKLLN LQKSDDAFQA YMFAVTTSFD PHTNYFSPDE FENFQIDLSR SLEGIGAKLQ MESDFTVVNE IIPGGPAFKS SLLKKSDRII GVGQGRTSEI VDVTGWRLND VVKKIRGPKG TYVRLKILPA SQAGRGPAKI VQLVRDKINL DEQAAQKRIM TLNNEKIGVI TIPSFYLDFE AQKRHAGRYN STSRDVARII GELKAQKVQG IIIDLRDNGG GSLEEAVNVT GLFISNGPVV QVSNSSGGKM VLRDEDNRVL FDGPIAVLVN RYSASASEIF AAAIQDYGRG VIIGERTFGK GTVQSIVKLT RPFSFFANKA ELGQMKLTIA KFYRISGEST QHKGVVPDIG ISSLIDTSSV GEDTYTSSLP WSTISKALYT PLGTTGKIST GRLLQQYKAR SSSQKVYQDY MRDLASLNAI RKKKVVSLNE KTFKTESERL KQIEQSWAVE QDGVKNPSKD FMLNRSAEIM SDMIPPDSGS QALK
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