| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1302 |
|---|
| Symbol | |
|---|
| ID | 4570842 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | - |
|---|
| Start bp | 1487371 |
|---|
| End bp | 1492530 |
|---|
| Gene Length | 5160 bp |
|---|
| Protein Length | 1719 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639765892 |
|---|
| Product | DEAD/DEAH box helicase domain-containing protein |
|---|
| Protein accession | YP_911758 |
|---|
| Protein GI | 119357114 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTCT TTAAGACTCA CGCAAGTATC ATAGAGGATT ATTCGTCCTA CATCCGCAGT
TTCATCACCA TAGCTGATCC AGAAATCAGT GGAGTTGTTG ATCGTGAATT AAGTACAGGA
AAACTTTGGC CAGAACCACT TCTTCAGTTT AACCCTTCGT TTGAAATGTT CGGAGGGTTT
GATGAGCTAA TTTTACATCC GACCATAGGA GAAATATTCA AGGGTTATAA GCTTTACCGT
CATCAGGTTG AAGCAATAAG ATTAGGTACC ACCGGCAAGG ATTTTATCGT TACATCCGGC
ACCGGATCGG GCAAGTCGTT GACCTATATC GGTTCTATTT TTCACCATCT TCTTTCGAAC
CCGGCAGCAA AAGGAGTTAC TGCGGTTGTC GTCTATCCCA TGAATGCCCT CATTAACTCG
CAGTTCGAAG AGTTCACCCG ATACAAAAAG AATTATGAGG ATGCCACCGG CAAAGAGTTT
CCGATCATCT TTGGCCAGTA TACAGGTCAG GAGGGTGAGG AGGCAAGGGA AAAAATGCGG
AAGAACCCGC CGCATATTCT CTTAACCAAC TACATGATGC TGGAGCTGTT GTTAACCCGC
GTACGCGAGC GCAACATTCG AGAGAGCATC TACCTGAATC TCCGGTTTCT GGTTTTCGAT
GAACTGCACA CCTATCGCGG TCGGCAGGGT GCGGATGTTT CCATGTTGAT TCGCCGGATT
CGATCCAATT GCGTCCAGCA GATCGTGAGT ATTGGTACTT CGGCCACCAT GGTTTCTGAT
AGTGTTGGTG ATATTGAGCA TCAGAAAGCA GAGGTTGCCA ACGTTGCCAC CAAACTCTTT
GGCTGCCCAT TCACCTCAGA GCAGGTTATC AACGAAAAGC TTGCCCGTTC ACTTTCTCCC
AACGGCACGA TTCCTGCCAG CCATTTCCTT GCATCGGCCA TTGAGTCAGC CATTAATCAG
GACTCCGATA TTGAGGCACT CAAAAAGAAT CCGATTGCCA TCTGGCTGGA GAACAAAATT
GCACTTGAAG AGCGAGGAAC TGATCTTGTT CGGGGCAAAC CAAAGCGGCT GAGAGAGATA
GCTTCAGAAT TGGCAAACGA TTCCGGAATG GCTGAAGAGA GGTGCCGTCT TTATCTGGTG
GATCTTCTCC TCTGGATAAG CGTCTCCAAT GTTCGGCAGC AAGAGTCGGG AGAGCGCTAC
ACCTTTCTGC CCTACAAGCT CCATCAGTTT ATTTCGCAAA CGGGTTCTGT CTATACAACC
CTTGATCAGG ATGAGAAGCG CGATATCTCT CTTGAGCCCG GGGTCTATAA AGTTGATGAG
ACCGACAAAA AACCAATATT TCCCAATGTC TTCAGTCGTG GAAGCGGCCA TCCCTTCATC
TGCGTCTCCC TTGCAGGTAA CCGATTGGAG CCACGTGAAT TTCGTGACAT GACCGAAGAT
GAGGAGAGCA ATGATGGTTA CTTGATTATT GGCGAAGAGA TCTGGAATCT CGATGAAGAT
ATTGAAATGC TTCCCGAATC CTGGTTTCGC AGAACAAAGT CGGGTGTTAC GCTCGACAGC
AAGAAAAGGG GATACTTTCC CGTTAAACTC TGGTTTGACG AATTCGGAAA CTGCTCCGAC
AAAGAAGAAA AAAAATGGTG GGGCTGGTTC ATGAAGGCTC CGTTACTTTT TGATCCCACA
TCGGGCGGTT TTTTTGATAC CAGAACCAAT GAGGGCACCA AACTGACCAA GCTGGGCAGC
GAAGGGCGCA GTACCTCCAC TACCATCACC GCCTTCTCCA TTCTCAATCG TCTCAGTGAC
GCTGGCTACG CGATAAAAGA GCAGAAGCTG CTCAGCTTTA CCGATAATCG TCAGGATGCG
GCCCTGCAGG CAGGACATTT CAATGACTTT GTGCAGGTCA TTCGCCTTCG TGCAGGCATT
CATAAGGCAT TGCAGCAGGC ACCAGTGGGC ATGCTCACCT TTGCCACCCT TGGCGAGGCC
GTTTTCAAGG CGCTTGGGCT CCCGTTTCTT GAGTATGCCA ACAGAAGCGA GGAGTCGATG
TTGGCTCCAA TCCGGCGAAA ATATGAGCAG GCGCTTCAGG ATTTCCTGCT TTATCGTTCC
ATGGCTGATC TCCGGCGGAG CTGGAGAGTA GTGTTGCCCA ACCTTGAACA ATGCGCCCTG
TTGACCATAG AGTACGAGGA TCTGGATGAA ATTATCGCTA CCGATGCATT CTGGGCCGTA
TCGCCCCTCT TTGGAACGCT GAATCATTCA GATCGTAAAG AGTTGGTGAC CACCATTCTC
GATTTTTTCC GGCTTGAATA TGCCATACAC AGCGAAAACT TTCTTACCCA GTCACGCATA
CAGGAATCCG AGCGGCAGTT CCGCGAGTCG TTAAAACAGC CCTGGACTCT CGATCGTAAT
GAGAAGCTTC AGGAACCCTA CTACATCCGC TATCAAAAGC TCAGCAAAAC CGCCAAACTC
TACACCAAAA GCATGGGGCC CGCCAGCTCT CTGGGGAAGT TCATCAGGGA TTATGTCAAA
CGGCAAAACC TTGGGATCGA CCTGAAAAAA GAGGGGTATA AAAACCTGAT CATGCAGACG
ATGGAGATGC TGGAACAGGC CGACTATCTG AAATCATTTC CTGCCCGGAG CGAGCAGAAT
GAAGAGGTAC TCATCTACCG TTTACGACTC GAAAAGGTTA TCTGGAAAGC GGGGGAGGGG
CTGACGGTCA AGGCAGACAT TATCAAACGA CGCACCTATA AAAAGCAGAG ACCCGAGCCC
AATCTCTTTT TCAAAACGCT CTATTGTCGT GATTTCTCAA CCATGAAACG GCTGCGAAGT
GAAGACCATA CCGGACAGTT GAGTAATGAA GCACGGCTGG ATCGTGAAGA GCGATTCCGG
GCCGATTGGT ACACCGATGA AGGCAAGCGG GTGGCTGACC AGCAAAAGAT AAGAGCCGAA
TCAATCAGCG TGCTTTTCTG CTCCCCGACC ATGGAACTTG GCGTTGATAT CGGTTCACTC
AATGTTGTCC ACATGCGCAA CGCTCCTCCA AACCCCTCCA ACTATGCCCA GCGTTCAGGC
AGAGCAGGCC GGAGTGGTCA GGGAGCACTT ATCTTTACCT ACTGCTCAAG TTATGCCCCC
CATGATCGCC ACTACTTTAA CAATCAGCGC GAACTGGTTG CAGGTACGGT CATGGCGCCG
CGTCTCGATC TGAATAATGA GGAGCTGCTG CGTGCCCATT TGCACGCTCT GGTAGCCTCA
GAGGTTGGCA TTCCCGGCCT TGACGAGGGT ATCGGCTCAA GACCATCCAT CATGCATCTT
GTAACCGATG ATAACAACAA GATGCCTCTT GCCGAGAGCG TTCGGGCCGG GCTTCAGCTC
TCTCCGGTAC AGTTTGATCG GATAAAAGCC AATTTCAGGA GGGTAATCCG CGATTTTGAA
CCGGAACTGG AAGCAAAAGC TGCATGGTAT TCCGATCAAT GGATTGAGCA AAACCTTTCG
AAGATTATTG AAACCCTCGA TGAAGCACTC GATCGCTGGA GGCTCATCTA TCGGTCGGCA
AGGGCAATTC TGACAAAGGC GACCCAGAAG ATCGAAAGCG GCACGCTGAG CCTTGGCAGC
GAAGAGTATC GCAAATACAA ACGCCATCAG GATCAGGCCA CCCGTCAACT GGACCTGCTT
CGCAATCATC TTTCCGGCAA GGCATCGGAA CTCTCCGAGT TTTACCCCTA CCGCTATCTT
GCTTCCCAAG GGTTCCTGCC CGGCTACAAC TTTACACGCC TTCCTCTTCG TGTCTTTTTA
CCCGACGGTG ATTCTGCCGG GCTCTTTGTC TCCCGCCCCC GCTCACTGGC TCTCAGGGAG
TTCGGGCCCC AGAATATCAT CTATCACAGC GGGCGGAAGT ACCGGGTGTG CCAGTTGATT
ATGCAGGATA CCGAATCCTC TCTTACCGAG GCAAAAATCA GTACCCGGTC AGGATATTTC
CTCCCCGCAG ACCAGAAGGA TCTTGAAATC TGTCCTTTTT CGGGGTTGAA TCTTGGCGAC
AATGCCAACA AAATGCATAT CCATGACCTG CTCGAAATGT CGGAGTCACG CGCTGAAGAA
GTTGACCGCA TCTCTTGCGA AGAGGAGGAA CGGCTCTCCA AAGGCTTTGA TATCCGAACC
TTCTTTACTG TTGACGGCGG CCAGGTTGAG CGGGTGCGTA AAGCAATCGT CTCAAGCAGT
GAGGGTAGCC TGCTGAATGT GCGTTATATT CCGGCAGCCC GGCTTGTCCA TATCAACTTC
AAATGGAAGG CTCAGGAGGC CGAAGGGTTT CCCATCGGCA TGGTCTCTGG CGACTGGCGT
AGCTCTCTTC CTGATCAGGA GGCCCAGAGC AGTGAGCAAT TCCGGCGAGT GAAATTGATG
ACCTCAAACC TCGCTGATGC CTTGTATATC GAGCCGATTC AACCGCTTGG GTTAAAACCG
GATGGGGTCA TTACGCTCCA GCATGCCCTG AAGAGAGCCA TCGAACTTGT CTTTCAAGTG
GAACCACGAG AGATCGGTGT GGTAACAGTC GGCGACCCGG AAGCCCCCAA TATCCTGCTC
TATGAAGCGG CGGAAGGGAG CCTTGGAATC CTCTCCCAGT TTGTCGAAAA TGTTCACGCT
TTCCATCAGG TGGTACAGCA AGCCATAGCC CTTTGCCGTT ATGATGATCC TGAATACAAA
GGGCCAGCCT CATACAATGA CTTGCTCAGT TATTACAACC AGCGTGACCA CAAAATTATT
GACCGTTACC TCATCAAGGA GGCGCTTGAA AAGCTGATGC TCTGCACCAT CGAGATTCAG
ACCAACAAAA GTTATAACAA CTACGAAGAG CACTACCAGA CGCTGCTCGG CGGGATCGAT
CCCAATTCGA GTACCGAGCG GAAGTTCCTT GATTTTCTCT ATAAAAACGG CATCCGCCTG
CCCGATGCCG CCCAGAAGAG GGTAGAGGGA ATCTATGCGC AACCCGATTT CTATTATGAA
CCCCGCATCT GGGTCTTTTG CGATGGAACA CCCCACGACA ATGCTGCGAT GCAGGAAAAA
GATGAGGCAC TACGCCAGGC CATCATTGCC AAGGGTGATG AGGTCTGGAC ATATTATTAC
AGGGACAATC TGGCCGAAAA GGTGGCCGGG CGTCCTGATA TTTTCAGGAA AGTAAAATGA
|
|---|
| Protein sequence | MNVFKTHASI IEDYSSYIRS FITIADPEIS GVVDRELSTG KLWPEPLLQF NPSFEMFGGF
DELILHPTIG EIFKGYKLYR HQVEAIRLGT TGKDFIVTSG TGSGKSLTYI GSIFHHLLSN
PAAKGVTAVV VYPMNALINS QFEEFTRYKK NYEDATGKEF PIIFGQYTGQ EGEEAREKMR
KNPPHILLTN YMMLELLLTR VRERNIRESI YLNLRFLVFD ELHTYRGRQG ADVSMLIRRI
RSNCVQQIVS IGTSATMVSD SVGDIEHQKA EVANVATKLF GCPFTSEQVI NEKLARSLSP
NGTIPASHFL ASAIESAINQ DSDIEALKKN PIAIWLENKI ALEERGTDLV RGKPKRLREI
ASELANDSGM AEERCRLYLV DLLLWISVSN VRQQESGERY TFLPYKLHQF ISQTGSVYTT
LDQDEKRDIS LEPGVYKVDE TDKKPIFPNV FSRGSGHPFI CVSLAGNRLE PREFRDMTED
EESNDGYLII GEEIWNLDED IEMLPESWFR RTKSGVTLDS KKRGYFPVKL WFDEFGNCSD
KEEKKWWGWF MKAPLLFDPT SGGFFDTRTN EGTKLTKLGS EGRSTSTTIT AFSILNRLSD
AGYAIKEQKL LSFTDNRQDA ALQAGHFNDF VQVIRLRAGI HKALQQAPVG MLTFATLGEA
VFKALGLPFL EYANRSEESM LAPIRRKYEQ ALQDFLLYRS MADLRRSWRV VLPNLEQCAL
LTIEYEDLDE IIATDAFWAV SPLFGTLNHS DRKELVTTIL DFFRLEYAIH SENFLTQSRI
QESERQFRES LKQPWTLDRN EKLQEPYYIR YQKLSKTAKL YTKSMGPASS LGKFIRDYVK
RQNLGIDLKK EGYKNLIMQT MEMLEQADYL KSFPARSEQN EEVLIYRLRL EKVIWKAGEG
LTVKADIIKR RTYKKQRPEP NLFFKTLYCR DFSTMKRLRS EDHTGQLSNE ARLDREERFR
ADWYTDEGKR VADQQKIRAE SISVLFCSPT MELGVDIGSL NVVHMRNAPP NPSNYAQRSG
RAGRSGQGAL IFTYCSSYAP HDRHYFNNQR ELVAGTVMAP RLDLNNEELL RAHLHALVAS
EVGIPGLDEG IGSRPSIMHL VTDDNNKMPL AESVRAGLQL SPVQFDRIKA NFRRVIRDFE
PELEAKAAWY SDQWIEQNLS KIIETLDEAL DRWRLIYRSA RAILTKATQK IESGTLSLGS
EEYRKYKRHQ DQATRQLDLL RNHLSGKASE LSEFYPYRYL ASQGFLPGYN FTRLPLRVFL
PDGDSAGLFV SRPRSLALRE FGPQNIIYHS GRKYRVCQLI MQDTESSLTE AKISTRSGYF
LPADQKDLEI CPFSGLNLGD NANKMHIHDL LEMSESRAEE VDRISCEEEE RLSKGFDIRT
FFTVDGGQVE RVRKAIVSSS EGSLLNVRYI PAARLVHINF KWKAQEAEGF PIGMVSGDWR
SSLPDQEAQS SEQFRRVKLM TSNLADALYI EPIQPLGLKP DGVITLQHAL KRAIELVFQV
EPREIGVVTV GDPEAPNILL YEAAEGSLGI LSQFVENVHA FHQVVQQAIA LCRYDDPEYK
GPASYNDLLS YYNQRDHKII DRYLIKEALE KLMLCTIEIQ TNKSYNNYEE HYQTLLGGID
PNSSTERKFL DFLYKNGIRL PDAAQKRVEG IYAQPDFYYE PRIWVFCDGT PHDNAAMQEK
DEALRQAIIA KGDEVWTYYY RDNLAEKVAG RPDIFRKVK
|
|---|
| |