| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1271 |
|---|
| Symbol | |
|---|
| ID | 4570481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | - |
|---|
| Start bp | 1449477 |
|---|
| End bp | 1450637 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 639765862 |
|---|
| Product | malate dehydrogenase |
|---|
| Protein accession | YP_911728 |
|---|
| Protein GI | 119357084 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0281] Malic enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000347822 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTATT CAAAAAAATC TCTTGAATTG CATCGTAAAA CACGAGGCAA AATAGAAATC
AAGTCAAAAG TAAGCCTGAA AACCAAAAAC GACCTTTCGC TTGCCTATAC TCCCGGAGTA
GCCGCTGTCT GTATGGAAAT AGGGCGTGAC CGGCAGCTAT CCTATACCCT GACCAATCGG
GCAAGTCAGG TAGCGATTGT TTCCGACGGC ACAGCTATTC TTGGCCTTGG TGATCTGGGT
CCGGAAGCGG CAATGCCGGT AATGGAGGGA AAGGCGATCA TCTTTAAGGA GTTTGCCGAT
ATTGATGCTA TTCCGCTCTG CATAAATTCT ACCGAAGTTG AAGATATCGT AAAATTCTGC
AAACTTATTG AGCCAAGTTT TGCGGGTATC AACCTCGAAG ATATAGCTGC GCCAAGATGT
TTTGAGATTC TCGAAAGGCT TGAACGTGAA CTCTCAATAC CGGTTTTTCA TGACGATCAG
GACGGAACGG CCATCATAAC TCTGGCAGCC ATCATCAATG CCTGCCGACT GTTCGATCGT
AAGCTGAACG ACCTGCATGT TGTCATCAAT GGTGCCGGAG CGGCAGGTAT TGCGATTGCA
AAACTTCTGA TTCATGCCGG ACTTAAAGAG GTTGTTCTGG TAGATACCAA AGGTGCGATC
TACTCCGGTC GACCGGAAAT GAACAGAATA AAACAGGGAA TTGCTGAAAA AACGAACCGG
GCGAAATATC AAGGGGATCT GAAAAGTTCG TTGATCGGAG CAGATGTTTT TATCGGCGTC
TCAAGGGGAA ATATTCTGAC TGAAGAGATG ATTAAGGGGA TGAACGACGC CCCTTTTATT
TTTGCCATGG CTAATCCGGA ACCGGAGATC ATGCCCGATC GTGCTTATAA GGCCGGGGCT
GCCGTTGTCG GTACCGGACG GTCGGATTTG CCCAACCAGG TTAATAATGC GTTGGTTTTC
CCCGGGTTGT TTAAAGGATT GCTCAAATCC GGGATCACTG AAGTTACTCC TGAAATCAAA
ATGGCGGTAG CGTTTTCTAT TGCCCACTCT ATTGAACCAA CACGTGACAG CCTCATGCCT
ACCGCTTTTA ATAAACAAGT CGTAACAGGC ATTGTGGATG TTCTGTCTGG CATTCAGGCA
AAAAAAGCAA CTGCTGAGTA A
|
|---|
| Protein sequence | MDYSKKSLEL HRKTRGKIEI KSKVSLKTKN DLSLAYTPGV AAVCMEIGRD RQLSYTLTNR
ASQVAIVSDG TAILGLGDLG PEAAMPVMEG KAIIFKEFAD IDAIPLCINS TEVEDIVKFC
KLIEPSFAGI NLEDIAAPRC FEILERLERE LSIPVFHDDQ DGTAIITLAA IINACRLFDR
KLNDLHVVIN GAGAAGIAIA KLLIHAGLKE VVLVDTKGAI YSGRPEMNRI KQGIAEKTNR
AKYQGDLKSS LIGADVFIGV SRGNILTEEM IKGMNDAPFI FAMANPEPEI MPDRAYKAGA
AVVGTGRSDL PNQVNNALVF PGLFKGLLKS GITEVTPEIK MAVAFSIAHS IEPTRDSLMP
TAFNKQVVTG IVDVLSGIQA KKATAE
|
|---|
| |