| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1264 |
|---|
| Symbol | |
|---|
| ID | 4570398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | - |
|---|
| Start bp | 1437957 |
|---|
| End bp | 1439540 |
|---|
| Gene Length | 1584 bp |
|---|
| Protein Length | 527 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639765855 |
|---|
| Product | carbohydrate kinase, YjeF related protein |
|---|
| Protein accession | YP_911721 |
|---|
| Protein GI | 119357077 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
|---|
| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCCTG TCGTAACGGC TATTGAGATG TCGAAGGCCG ATAAAGCGGC CATTGAGGAA
CTCCGTATAG GTGAGAGTCG TCTCATGGAG CTTGCAGGCA GCGAAGCGGC CGATATCATT
CTGAAGGCTC TCGAAAAAAA CGATAATCCC GAAGGTTGCT CGTTTCTTGT GGTGTGCGGA
AAAGGAAATA ACGGCGGTGA CGGTTTTGTT GTTGCCCGAC ACCTTCTTAA CCGCGGCGCT
ACGGTAGACG TTGTGCTGCT TTGCCCCCCG GAAACCCTTA AGCCTGTCAA CAGGGAGGGG
TATCTGATCC TTGAGGCTTA CAGGCATCAT AATGAGCCTC TTCGGATTTT TCATGGCATT
GAAGAAGCAA TTGACAGCAT AACTGAAACC GGTTATTCTG CGCTGATCGA CGGCATTCTC
GGTACAGGTC TTCGAATCAC TCAGGCTGGC GAAGCACTGC CTGAACCGAT CGCCTCTGCG
ATTACGCTGC TCAACACCCT TCGCCATAAC TCGGACGCTC TCATAGCAGC TCTTGATGTT
CCTTCAGGTC TGGATGCCAC GACAGGGCTC TCTGCTTCGC CTGCTGTGAT TGCAGACCTC
ACCGTAACCA TGGCATTTCT GAAAACCGGT TTTTTTTTCA ATGAGGGCCC CCTTCATTGC
GGCGATCTTC ATACTGCCGA AATATCAATA CCCCGTTTTA TTGCTGAACC GGTATCCACG
CTTTTGACGG ACGGGGAGTT CGCTGCCGAA CAGTTCATCA TGCGAAATCC CGCCGCGGCA
AAACATCAAA ACGGAAAAGT TCTGATTATT GCCGGGTCAA TATCTTCAAC ATCTTCCATG
ATCGGGGCTG CAATGCTTGC TGTAAAAGCA GCATTAAAAA CAGGTGCCGG CTACGTTTGC
GTTTCACTGC CGCTGACGCA TGCCGCTGCA ATGCACGCAT TTGCTCCCGG AGCTGTAGTT
ATCGGACGGG ATCTTGACGT TATAGCAGAA AAAGCCCGAT GGGCTGACGC TGTGCTGATA
GGATGCGGAC TTGGCAGGGA TAGTGCATCC GTGAGCTTTA TTGCCGATCT GCTTCAACGA
AAGGAGATTG CCGCCAATAA ACTTGTCATT GACGCCGACG CGCTCTATGC GCTCGCTTTA
CCGGATCTTT CGTCGTTATC GTTTGGGTTT TCCGATGCTA TCCTGACACC GCATTACGGA
GAGATGAGTC GACTGAGCGG CTTCTCGGTG GAAAGCATTG CCTGCGATCC TCTTGATACG
GCAAGAACGT ATGCTGAAAA ACATCGGGTA AATCTGCTTC TGAAAGGATA TCCAACTGTA
ATTGCAGCGC CTTCCGATCC GGTGCTCCTG AATACTACAG GCACAGATGC TCTGGGAACG
GCCGGTTCGG GAGATATTCT TTCGGGAATG ATTGCCGCCC TTGCCGCCAA AGGAGCAACA
ACCTTCAATG CCGGCGCTGC CGCTGCCTGG TTTCATGGAA GGGCCGGCGA TCTTGCCGGA
ACCATATCAA GCATTGTTTC CGCTGAAGAT ATTCTCGAAG CGATCCCGTC TGCCATTCAG
GAAATTTTTC ATATAGAAGA ATAA
|
|---|
| Protein sequence | MLPVVTAIEM SKADKAAIEE LRIGESRLME LAGSEAADII LKALEKNDNP EGCSFLVVCG
KGNNGGDGFV VARHLLNRGA TVDVVLLCPP ETLKPVNREG YLILEAYRHH NEPLRIFHGI
EEAIDSITET GYSALIDGIL GTGLRITQAG EALPEPIASA ITLLNTLRHN SDALIAALDV
PSGLDATTGL SASPAVIADL TVTMAFLKTG FFFNEGPLHC GDLHTAEISI PRFIAEPVST
LLTDGEFAAE QFIMRNPAAA KHQNGKVLII AGSISSTSSM IGAAMLAVKA ALKTGAGYVC
VSLPLTHAAA MHAFAPGAVV IGRDLDVIAE KARWADAVLI GCGLGRDSAS VSFIADLLQR
KEIAANKLVI DADALYALAL PDLSSLSFGF SDAILTPHYG EMSRLSGFSV ESIACDPLDT
ARTYAEKHRV NLLLKGYPTV IAAPSDPVLL NTTGTDALGT AGSGDILSGM IAALAAKGAT
TFNAGAAAAW FHGRAGDLAG TISSIVSAED ILEAIPSAIQ EIFHIEE
|
|---|
| |