Gene Cpha266_1242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1242 
Symbol 
ID4570260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp1408916 
End bp1410118 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content53% 
IMG OID639765833 
Producthypothetical protein 
Protein accessionYP_911699 
Protein GI119357055 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTTCAC TTGCCGGAAG GGATATACTG CATGGATGGG GACGTTTTCT CCTCACCGGT 
TTCGGTCTCG GCCTCCTGAT CGGTGTAACG CTGAGCATGG CCGGTATCTA CCGAGGAATG
GTTGATGACG CCAATGTTCT TATTGACAGC AGTGGCGCTG AACTTTGGGT GGTGCAGGAG
GGAACGCTTG GCCCTTATGC CGAACCATCG AGTATCTATG ACGATACCTA TCGGAGCATT
GCCGGAATGC AGGGGGTGGC CAGGGCCGCC AATATTACCT ATCTGACCAT GCAGGTGCGG
TGCGCCCAAC GTGATGTACG GGCTATGGTA GTCGGTGTCG TTCCAGGTGG TCCGGGAGAG
CCCGGACAAC CCGGCTTTCT CGTAGCCGGG CGCCATATTA CCGGTAGCCA CTATGAAGCT
GTTGCTGACG TTAATACCGG GTTTGCCATC GGCGATACCA TTGCCGTCCG CCGAAATCTC
TTCAGGGTTG TCGGACTTAC CCGGAGAATG GTGTCATCAG GAGGCGATCC AATGGTATTT
ATTCCCTTGA AAGATGCCGG TAAAGCGCAG TTTCTCAAGG ACAACGATAT GCTTCTTCAG
CAGAGGCGTC GCACGGCAGC AAACCCGCTC TTTAACCGTC AGGGGGCGCC GGGGCTGCTC
GATGCCGTCA TTGCCTCACA GACAACAAAC AGTTATGTAA ACGCCGTTCT GGTGCAACTG
AAGCCGGGAT ACGATCCGGA ACTTGTTGCC GAAAATATCC GGCGCTGGAA AAGGTTGCAG
GTCTATACCC GACCGCAGAT GAGAACGATT CTTGTCGACA AGCTGATTGC GACATCAGCA
AAACAGATCG GAATGTTTCT CGTTATTCTT TCCATTGTAA GCGCGGCAAT TATAGCATTT
ATCATCTATA CCATGACGAT GGCAAAGATC AGGGAGATAG CGGTGCTCAA GCTGATCGGA
ACAAGAAACA GGGTGATTGC AGCCATGATC CTTCAGCAGG CCCTCGGACT CGGAGCGATA
GGGTTTGTTG TCGGAAAAAT AGCCGCAACG CTCTGGTCGC CTTTTTTCCC GAGATATGTG
CTTCTTGAGC CGGGCGATGC TCTTCGCGGT TTTGTTATCG TTATGGTTAT CTCTTTTCTG
GCAAGCATTC TGGCTATTAT GGCAGCACTC AGGGTTGATC CAGCAGAAGC AATAGGAGGT
TGA
 
Protein sequence
MISLAGRDIL HGWGRFLLTG FGLGLLIGVT LSMAGIYRGM VDDANVLIDS SGAELWVVQE 
GTLGPYAEPS SIYDDTYRSI AGMQGVARAA NITYLTMQVR CAQRDVRAMV VGVVPGGPGE
PGQPGFLVAG RHITGSHYEA VADVNTGFAI GDTIAVRRNL FRVVGLTRRM VSSGGDPMVF
IPLKDAGKAQ FLKDNDMLLQ QRRRTAANPL FNRQGAPGLL DAVIASQTTN SYVNAVLVQL
KPGYDPELVA ENIRRWKRLQ VYTRPQMRTI LVDKLIATSA KQIGMFLVIL SIVSAAIIAF
IIYTMTMAKI REIAVLKLIG TRNRVIAAMI LQQALGLGAI GFVVGKIAAT LWSPFFPRYV
LLEPGDALRG FVIVMVISFL ASILAIMAAL RVDPAEAIGG