| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1203 |
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| Symbol | |
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| ID | 4570071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | - |
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| Start bp | 1365920 |
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| End bp | 1371229 |
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| Gene Length | 5310 bp |
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| Protein Length | 1769 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639765797 |
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| Product | outer membrane autotransporter |
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| Protein accession | YP_911663 |
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| Protein GI | 119357019 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTAC GCCGTATTCC CACGCTCTCT TCGGGTATTA CTGATCGTTC CGAACGTAAA
AAGCAGGCTC GCCCCAGTGG CCGCAGCGGA ATCCGCCTCT GTCTGCTTCT GGCCCTTCTA
TGCCACACAG GAATACCCGA AAGCGCATCC GGTGAATATT TGAAGGCTAA CTATAGTAGT
CCTATCAAAC TGAATGAATC TACCGCTTAT GAGAACAAAA AAAACGTAGT GCAATATCAA
GACGTAACTA TAACTGAGAA CGGTGCCGTA GATACCTGGA ATACAACAGA GATTAAAATA
GGAGGATTAG GCAAAAAATT GTCCATTAAT GGCACACTAT ACAATAATGG ATCATTATCT
AACAATGCCT TTTCAACTGC CAAGATCAAT ATCGGCAGCA CCGGAATACT GAACAATACT
GGCTCGGTGA CCAATAATTA CGAGTTGAAC AACAGCGGCT TGCTGACGAA CAGCGGCACG
CTGACCAACA ATTTTTTACT CAACAACAGC GGCTCTTTCA CTATCAATAA TGGCGGCTCT
TTCAACAACA GCGGAGTATT GTCGGTACTG ACAAACAGCG GTTCTTTCAC CATCGATAAT
GGTGGTTCGC TGACGAATTC GGGGACGATA ACGAATAGCG GCACCGGCAC GCTCAACAAT
GCGGGTTCGT TGACCAACAA TTTTTTGCTC AACAACAGCG GCTCTTTCAC TATCAATAAT
GGCGGCATAC TGACCAATAG CGGCTTGCTC ACCAACAACG AAAACTTCAT CAATTATGGT
ACGCTGAACA ATACCAGCTC TTCAGGCGGC CTGAATTTAT CGGATTTTTT TGAAGGAACA
GATATCACTA TAAACCCGGC AGACCTGATT GCTTTAATCA CAGGTGGTGG CGTCCTCTAT
AATACCGATA CCCTCACCAA CAACGGTACG CTGAACAATG AGTTCGTGTT GTGGAACGAT
GGCACGCTGA ACAATACCAT CACACTGAAC AACAACTTCC TGCTGGTCAA CCTTAACAAT
CTCAATAACA GCGGAACCCT GACCAACGAT GGGATTCTTT ATAATAACAG CAACCTGACC
AACACCGGTA TCCTCAACAA CACCGGTACC GGCTCTTTTG ACCTTACTTC GTTTTTTGAC
GTTGATAACT TGACTTTCGA CTTCAGTGAT TTGTCAGGCC TTCTCAGCGG CAATGGCATC
CTTTTGAACT TAACCGACGG AACAATCGAA AACAGCGGCA CGCTGAATAA CGACGGTTTT
CTGATCAATC TGGGTACGCT GAACAATACC AGCCCGACCA CGCTGAACAA CAATTTCCTT
CTGGTCAATT CAGGAGATCT GAACAATGAA TCTGGAGCTG AGGCATACAA CAACGGCATC
ATGGTTAACC TTGGTACGTT CACCAATGCA GGCCAATTTT CCAACAGAAG CGAGGTTCCG
GATCTTGTTT CCGAGCTGAC ATCCCTTGAC CCCGACAATC TGCTCGGTGA CATCGTTTCC
ACGTTGACCA GCGGGATCAT GGTCAATCTT GATAAAGTGG AGAACTCCGG CACGTTTGAC
AATAACTTTG TTTTTGCCAA CATCGGTTCT TTTGAGAACC AAAGCGGCGG AGAGCTGAAC
AACAACTTCC TGCTCGTCAA TGCCGACAAC CTGTGGAATC AGAACGGTGG CAGCATGACC
AACAGCGGCC TCTTCCTGAA CTTCGGTTCA TTCGCCAACG ATGGCACGCT TGATAACAAC
GGCCCGATCG GCGCATTGTT CTCTGGCAGC CCGTTCTCGC TGAACACCGA GACTCTCGAC
AACCCGCTGC AGCTCGGAAC GATTTACAAC GGCGGCACTA TCGACAATAC CGGCGACTTC
ACCAACCGCT TCATCGTTTA CAACGACGGA CAGATGAACA CCAGCGGTAC CTTCGAGAAC
CAGTTCCTGC TCGTCAATGC CGACAACCTG TGGAATCAGA GCGGCGGCAA CATGACCAAC
AGCGGCCTCT TCCTGAATTT CGGTTCATTC AACAACGAAG GCACGCTTGA CAACAACGGC
CCGATCGGCG GCGCATTATT TTCGGGCAGC GCATTTGCTC TCGATGCAAA TACGCTCGAC
AACCCTCTGC AGCTCGGAAC GATCTACAAC GGCGACACGC TCGACAATAC CGGCATCTTC
ACCAACCGCT TCATCGTCTA TAACGACGGA CAAATGAACA CCAGCGGCAC GTTCGATAAC
CAGTTCCTGC TTGTCAATGC CGACAACCTG TGGAATCAGA AAGGCGGCAG CATGACCAAC
AGCGGCCTCT TCCTGAACTT CGGTTCATTC ACCAACGACG GTACGCTTGT CAACAATGGC
CCCGTCAACA CATCGTTTGC AGGCAGCGCA TTTGCTCTCG ATGCAAATAC GCTCGACAAC
CCTCTGCAGC TCGGTGCTAT CTACAACGGC GGCACGCTCG ACAATGCCGG CATCTTCACC
AACCGCTTCA TCGTCTATAA CGACGGACAG ATGAACACCA GCGGCACGTT CGATAACCAG
TTCCTGCTCG TCAATGCCGA CAACCTGTGG AATCAGACAG CCGGCAACAT GACCAACAGC
GGGCTCTTCC TGAACTTCGG CTCATTCACC AACGACGGTT CGCTTGTCAA CGAGGGTCCG
TTCGGCGCAT CGCTTGCAGG CAGCGCATTT GCACTCAACT CCAATACGCT TGACAACCCG
CTGCAGCTCG GTGCTATCTA CATCGGCGGC GAGATGAACA ATATCGGCAC CTTCACCAAC
CGGTTCATCA TGTACAATGA CGGACAAATG AACACCAGCG GCACGTTCGA TAACCAGTTC
CTGCTCGTCA ATGCGGACAA CCTGTGGAAT CAGACAGCCG GCACCTTGAC GAACACCGGC
CTCTTCCTGA ACTTCGGCAC ACTCAACAAC GACGGTTCGC TTGTCAACAA TGGCCCCGTC
AACACATCGT TTGCAGGCAG CGCATTTGCT CTCGATGCAA ATACGCTCGA CAACCCTCTG
CAGCTCGGTG CTATCTACAA CGGCGGCACG CTCGACAATG CCGGCATCTT CACCAACCGC
TTCATCGTCT ATAACGACGG ACAGATGAAC ACCAGCGGCA CGTTCGATAA CCAGTTCCTG
CTCGTCAATG CCGACAACCT GTGGAATCAG ACAGCCGGCA ACATGACCAA CAGCGGGCTC
TTCCTGAACT TCGGCACACT CAACAACGAC GGTTCGCTTG TCAACAATGG CCCCGTCAAC
ACATCGTTTG CAGGCAGCGC ATTTGCTCTC GATGCAAATA CGCTCGACAA CCCTCTGCAG
CTCGGTGCTA TCTACAACGG CGGCGAGATG AACAATATCG GCACCTTCAC CAACCGGTTC
ATCATGTACA ATGACGGACA GATGAACACC AGCGGCACGT TCGATAACCA GTTCCTGCTC
GTCAATGCCG ACAACCTGTG GAATCAGACA GCCGGCAACA TGACCAACAG CGGGCTCTTC
CTGAACTTCG GCTCATTCAC CAACGACGGT TCGCTTGTCA ACGAGGGTCC GTTCGGCGCA
TCGTTGCCTG AGAATGTCTT GACGTTTACA GAAAGTGATC TTGACAATCC GATCCAGCTC
GGTGCTATCT ACAACGGCGG CAACATGACG AATTCCGGAA CCTTCGAAAA CGGGTTCCTG
CTGGTCAACG CCAACGAGCT ATGGAACAAG GAAGAGGGCA CCATAACGAA CACTGGCCTG
ATTCTGAACT TCGATACGCT GACCAACGAC GGCACGCTTG TCAACAATGG CTCGTTGGTC
AATACCGGTG AGATAAACAA TAATGGCACC CTTCAGGGGA ACGGCACCAT TATAGGCAAC
TTCACAAATG ACGGCACCAT TGCTCCCGGA AATTCGATCG GCACACTGAC TCAATACGGC
ATTTATACGC ACAACGCAAA GGCGGTTTAT GCTCTCGATG TAAACAGCAA CGGCAATTCG
GATCTGATCG AGGTCAAGGA TGTATTGATC TTCATTGGCG GCAAAACATA CTTGAAAGGC
GGTATTGTGA ATGTTACGCC TGAACCCGGG GACTACAGGT GGGGCACATC ATACACGATT
GTCACCACCG ACAAAGGAGT TGTCGGCACA TTCGACGATG TCGAATTCCC GCTGGCCGCT
CCGTTCCTTG CGCCATCGTT ACGTTACACA AACAGAAACG TCTATCTGGA TCTCATTTCA
AACTTCACCC CTTCGGCACA AACCGATAAT CAGCATGCAG TCGCATCAGC TCTTGACTCC
GTTCCGGTTT CAATACATGG CGACATGGCT GACGTCATGA ACTGCATGGT CTATCTGCCG
ACCGAAAATG CCGCGCTCAT GGCGATCGAC CGCATCAGCG GACACATTCA CGCTGCGCTT
CCCGAAGCCA CGCTCTACTC GGTCGATCGA TACCTCGGTG CCGTATCAGG CCATTTCGGC
GGATTCAGCA TGAATGATAA ACAAGGCATC GAAAGCGGAT TCTGGAGCAG CGGATTCGGC
GGCTGGGGCG ACCGTGAGGG CTCGGAAATC GGTTCACGAT ACGCTTATGA CCTTACCGGC
GGAATTTTCG GATATGACCA CAAACTCAGC GAAACCCTGT TGCTCGGTGC ATCTGTCGGT
TACGCATCGA TGGATCTATC CATGGATGAT CTCAGCGAAA ACGCCGATGC GGAAAGCTGG
CAGGGTGCTA TCTATGGCCT TTACAAAGAC GGCCCCATCC ATGTCGGCCT TATCGGGTCC
TATGGCAGCC ACGACTACAA GACCACAAGA AATATCGATT TCTCATGCGT CAATCGTACA
GCTGCGGCTG ATTACAACGC CTACGACCTG AGCGCGCACC TTGAAGCCGG ATACCGCATC
GACACCGGTA AGAATACCTA TGTCATGCCT ACCGCCTCCT TGCAGGCTAT CTGGCTGAAC
CGTGATGCGT TCACCGAAAA CGGGGCCTCC GCGCTGAACC TCATCGTCGA CGAGGAGCAG
ACCACATCGA TTCCCGGTCG GATCGGGCTG ACCTTCGGCG GAGAAACCAC GAATAGGAAT
GGAGGAAAAT TCACTCCTGA AGTCCGGGTC GCCTGGCGTC ACGAATTTGC GGCCGACAAT
CAGTACTCGC ACCAGGCATC GTTTGCCGGA GCGCCTGCAC AATCATTCTT CATCAAAGGC
GATGGCGTGA AGCGCGACAG CTTCGAAGCA GGCGCTACGC TTGCTTACGA GACGAAGTCA
GGTACCAGTG TTTTTGTTTC CTATGATGCC AATCTTGCCG GCGATATGAA CGAACAAACG
GCAGCATTCG GTTTCCGTTA TACATGGTAA
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| Protein sequence | MSLRRIPTLS SGITDRSERK KQARPSGRSG IRLCLLLALL CHTGIPESAS GEYLKANYSS
PIKLNESTAY ENKKNVVQYQ DVTITENGAV DTWNTTEIKI GGLGKKLSIN GTLYNNGSLS
NNAFSTAKIN IGSTGILNNT GSVTNNYELN NSGLLTNSGT LTNNFLLNNS GSFTINNGGS
FNNSGVLSVL TNSGSFTIDN GGSLTNSGTI TNSGTGTLNN AGSLTNNFLL NNSGSFTINN
GGILTNSGLL TNNENFINYG TLNNTSSSGG LNLSDFFEGT DITINPADLI ALITGGGVLY
NTDTLTNNGT LNNEFVLWND GTLNNTITLN NNFLLVNLNN LNNSGTLTND GILYNNSNLT
NTGILNNTGT GSFDLTSFFD VDNLTFDFSD LSGLLSGNGI LLNLTDGTIE NSGTLNNDGF
LINLGTLNNT SPTTLNNNFL LVNSGDLNNE SGAEAYNNGI MVNLGTFTNA GQFSNRSEVP
DLVSELTSLD PDNLLGDIVS TLTSGIMVNL DKVENSGTFD NNFVFANIGS FENQSGGELN
NNFLLVNADN LWNQNGGSMT NSGLFLNFGS FANDGTLDNN GPIGALFSGS PFSLNTETLD
NPLQLGTIYN GGTIDNTGDF TNRFIVYNDG QMNTSGTFEN QFLLVNADNL WNQSGGNMTN
SGLFLNFGSF NNEGTLDNNG PIGGALFSGS AFALDANTLD NPLQLGTIYN GDTLDNTGIF
TNRFIVYNDG QMNTSGTFDN QFLLVNADNL WNQKGGSMTN SGLFLNFGSF TNDGTLVNNG
PVNTSFAGSA FALDANTLDN PLQLGAIYNG GTLDNAGIFT NRFIVYNDGQ MNTSGTFDNQ
FLLVNADNLW NQTAGNMTNS GLFLNFGSFT NDGSLVNEGP FGASLAGSAF ALNSNTLDNP
LQLGAIYIGG EMNNIGTFTN RFIMYNDGQM NTSGTFDNQF LLVNADNLWN QTAGTLTNTG
LFLNFGTLNN DGSLVNNGPV NTSFAGSAFA LDANTLDNPL QLGAIYNGGT LDNAGIFTNR
FIVYNDGQMN TSGTFDNQFL LVNADNLWNQ TAGNMTNSGL FLNFGTLNND GSLVNNGPVN
TSFAGSAFAL DANTLDNPLQ LGAIYNGGEM NNIGTFTNRF IMYNDGQMNT SGTFDNQFLL
VNADNLWNQT AGNMTNSGLF LNFGSFTNDG SLVNEGPFGA SLPENVLTFT ESDLDNPIQL
GAIYNGGNMT NSGTFENGFL LVNANELWNK EEGTITNTGL ILNFDTLTND GTLVNNGSLV
NTGEINNNGT LQGNGTIIGN FTNDGTIAPG NSIGTLTQYG IYTHNAKAVY ALDVNSNGNS
DLIEVKDVLI FIGGKTYLKG GIVNVTPEPG DYRWGTSYTI VTTDKGVVGT FDDVEFPLAA
PFLAPSLRYT NRNVYLDLIS NFTPSAQTDN QHAVASALDS VPVSIHGDMA DVMNCMVYLP
TENAALMAID RISGHIHAAL PEATLYSVDR YLGAVSGHFG GFSMNDKQGI ESGFWSSGFG
GWGDREGSEI GSRYAYDLTG GIFGYDHKLS ETLLLGASVG YASMDLSMDD LSENADAESW
QGAIYGLYKD GPIHVGLIGS YGSHDYKTTR NIDFSCVNRT AAADYNAYDL SAHLEAGYRI
DTGKNTYVMP TASLQAIWLN RDAFTENGAS ALNLIVDEEQ TTSIPGRIGL TFGGETTNRN
GGKFTPEVRV AWRHEFAADN QYSHQASFAG APAQSFFIKG DGVKRDSFEA GATLAYETKS
GTSVFVSYDA NLAGDMNEQT AAFGFRYTW
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