Gene Cpha266_1180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1180 
Symbol 
ID4569938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp1331963 
End bp1333045 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content39% 
IMG OID639765775 
ProductABC transporter related 
Protein accessionYP_911641 
Protein GI119356997 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAGG TAGAGCATCT TTCAAAAAAT TTCGGAAACC TTGTTGTGCT TAAAAATGTC 
AACTTTGAAA TTAGTGAAGG AGAGGTGATT TCGATAATCG GTCCTTCCGG GACCGGAAAA
AGTACGTTAT TACGTTGTAT CAATCTGCTT GAACGACCAA GTGCCGGATC AATTTCTATT
GATGGGGTTG ATATACTTGA TTCCCGGACA GATGTACCGA AAATTCGACA GAAAATGAAT
ATGGTATTTC AGTCGTTCAA TCTTTTTACC CATCTTTCCG TAATTGAAAA TTTGACCATT
GCTCCCATTA AATTACTTGG CAAGAGTAAA AAAGATGCTG AGCATAAAGC CTTGAATATT
CTCGCAATGG TAGGGCTTGC CGAAAAGGCA TATAATTATC CGGATGAGCT TTCCGGTGGT
CAAAAACAAA GGGTTGCCAT TGCCCGGTGT CTTGCGATGG ATCCGGAAAT TATTCTTTTT
GATGAACCGA CTTCATCACT GGATCCTACC ATGGTCAGTG AGGTTTTGTC GGTTATTCGC
CGTCTTGCTA AAGAAGGCAT GACTATGGTA ATAGTCACTC ATGAAATGGA TTTTGCCAGA
GATGTATCTA ACAGAGTTAT GTATATGGAC GAGGGTGTTA TCTATGAAGA AGGTTCGCCT
GAACAGATAT TCGAGAACCC GAAAAAGGAA AAAACAAGGT CATTCATCAA CAGGATCAGA
GGTATCAACT TTCATATTGC CTCTCCAGCG TATGATCTCT GTACCATGAA TATCGAGATA
GATGCTTTTT GTGAAAAGCA GATCCTGCCA TTAAAAATAC GACGGAATTT GCTGACGATT
TTTCAAAATT TACTTGATAT TTACAGCCCT TTTCTTTTTG CCACACATCT TGATGTGACA
CTTTCTTATT CTGAAAAGAA ACAACGTGTT GAACTTGTAT GCGAAAGCAC GGGAGATATC
TCTGATTTGC TTGAAAAAAA TTCCCTTCCG GATGATTCTC CTTTGAGCAT TATTCGTGGT
TTGACGCAGA ACATCGATTA CCGGAGAGGG GTTGATAAGA ACACTTTAAC GCTTGTTTTA
TAA
 
Protein sequence
MIKVEHLSKN FGNLVVLKNV NFEISEGEVI SIIGPSGTGK STLLRCINLL ERPSAGSISI 
DGVDILDSRT DVPKIRQKMN MVFQSFNLFT HLSVIENLTI APIKLLGKSK KDAEHKALNI
LAMVGLAEKA YNYPDELSGG QKQRVAIARC LAMDPEIILF DEPTSSLDPT MVSEVLSVIR
RLAKEGMTMV IVTHEMDFAR DVSNRVMYMD EGVIYEEGSP EQIFENPKKE KTRSFINRIR
GINFHIASPA YDLCTMNIEI DAFCEKQILP LKIRRNLLTI FQNLLDIYSP FLFATHLDVT
LSYSEKKQRV ELVCESTGDI SDLLEKNSLP DDSPLSIIRG LTQNIDYRRG VDKNTLTLVL