Gene Cpha266_1179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1179 
Symbol 
ID4569937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand+ 
Start bp1330944 
End bp1331966 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content38% 
IMG OID639765774 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_911640 
Protein GI119356996 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.935409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATTTG AAATTCACAT GAAAAAGATG TCGCCAGTGT TAAGAGTATC AGTAAAATAT 
ACAACACTAT TCATTTTGGC AGGAACCATG TTTCATGCTC TCTTTTATGC AAAAGGAGTG 
GATGGTTCGG TATGGCTTAT TCAGAATAAT CAACATAACT ATGTCACCGT ATCGGGAGTT 
ATAGCCGGAA AGTATTGTGA AACAGGAAAA AGTGTTTTGC GGTTTGCTTG TATTGATCAA 
TTGGACAGCC TGTTTTTTTT GGGAAAACCT ATGCTATCCA GCAAACTGAA CGCTGCAAGT 
ATGGAAACGG GAGGGATCGT GTCGTTATTT TCTGATCTCG TCAGGAGCTT TCAGAGTAAT 
ATCATCCATG AGAATCGTTA TCTCCTTATT CTGGACGGAT TGAAAACAAC TGTTATTATA 
TCGGTTTTTT CAACTGTTTT AGGGACTTTT CTTGGAGCAA TGATATGTTT TATGCGAATG 
TCCCGTAACA GGTTACTGAG TGTTATTGCG AAATCCTATA TATCGATTTT GCGAGGTACT 
CCTGTGCTGG TGTTTTTGAT GTTGATGTTC TATGTCGTTT TTGCTTCGGT AGATATTAAT 
CCTGTTATTG TTTCTGTCAT TGCATTCGGG ATGAATTTTG CTGCATATGT TGCCGAAATT 
TACAGAGCCG GCATTAACAG CATAGACAAA GGGCAAGCAG AGGCGGGTAT TGCCATGGGT 
TTTACTAAGG TCAATACCTT TCTTTTCATT ATTTTGCCTC AAACTGTACT GCGCATTTTA 
CCCGTTTATA AAGGGGAATT TATTTCGCTT GTCAAAATGA CTTCAGTTGT CGGTTATATC 
GCTGTACAGG ACTTGACCAA GGCAAGCGAT ATTATCAGAA GTCGTACTTT TGATGCCTTT 
TTTCCTTTGG TAATGGTAGC AATTCTGTAT TTCTGTATTT CCTGGGTTCT TATGTTATTT 
CTGGAGTATG TTGAAAGGTT AGCGGATCCT AAATCAAAAA GAAGACAGAT TAAAAGCATA 
TGA
 
Protein sequence
MQFEIHMKKM SPVLRVSVKY TTLFILAGTM FHALFYAKGV DGSVWLIQNN QHNYVTVSGV 
IAGKYCETGK SVLRFACIDQ LDSLFFLGKP MLSSKLNAAS METGGIVSLF SDLVRSFQSN 
IIHENRYLLI LDGLKTTVII SVFSTVLGTF LGAMICFMRM SRNRLLSVIA KSYISILRGT 
PVLVFLMLMF YVVFASVDIN PVIVSVIAFG MNFAAYVAEI YRAGINSIDK GQAEAGIAMG 
FTKVNTFLFI ILPQTVLRIL PVYKGEFISL VKMTSVVGYI AVQDLTKASD IIRSRTFDAF 
FPLVMVAILY FCISWVLMLF LEYVERLADP KSKRRQIKSI