| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1177 |
|---|
| Symbol | |
|---|
| ID | 4569935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | - |
|---|
| Start bp | 1328224 |
|---|
| End bp | 1329825 |
|---|
| Gene Length | 1602 bp |
|---|
| Protein Length | 533 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639765772 |
|---|
| Product | peptide chain release factor 3 |
|---|
| Protein accession | YP_911638 |
|---|
| Protein GI | 119356994 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG4108] Peptide chain release factor RF-3 |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCAG AATTAAAAAG AGAAATTTCA AAACGACGAA CATTTGCCAT CATCAGCCAT
CCTGATGCCG GTAAAACAAC GCTGACAGAA AAATTCCTGC TTTTCGGCGG CGCCATCCAG
ACCGCCGGTG CGGTAAAAAG CAATAAAATC CGTAAAACCG CCACCAGCGA CTTTATGGAA
ATTGAAAAGC AGCGCGGCAT ATCCGTTGCG ACATCGGTCA TGGGGTTTGA GTATGCAGGC
AAGAGAATCA ATATTCTCGA CACTCCCGGT CACAAGGATT TTGCTGAAGA CACCTATCGT
ACCCTTACGG CTGTTGACAG CGTTATTCTT GTGGTCGACT GCGTAAAAGG GGTCGAGGAA
CAAACGGAAA AGCTGATGAG CGTATGCCGC ATGCGCCACA CTCCTGTAAT CATTTTTATC
AATAAAATGG ATCGGGAGGG CAAAGCTCCC ATCGAACTGC TTGACGAACT TGAGGAAAAA
CTGCAGATCA ATACCCGACC GCTGAGCTGG CCGATCAGTC AGGGACAAAC GTTCAAAGGG
GTTTACAATC TCTACACTTC AGCATTAAAC CTTTTTGAAG CAAACTCTTC AAGAATTTCC
GAAACCCTTG TCAAGATCCA GAGCCCCCAG GATCCGGAAC TTGAAAAATG GATTCCGGAG
AGCTTCTGCA AAAAACTCCG TGAAGATATA GCCCTGATTG AAGGAGTTTA TGAACCGTTC
AACGAAGAAC TCTACCGCGA CGGCCTGCTC GCTCCGGTTT TTTTCGGCAG CGCCATCAAT
AATTTCGGAG TAAAAGAGCT GCTTGAAACC TTTCTTTCCA TTGCGCCCTG CCCCTATGAA
CGCGATGCGA GAGAGCGAAC CGTCTTTGCG TCGGAAGAGG CCATGAGCGG ATTTGTCTTT
AAAATCCACG CAAACCTCGA CCCCAATCAC CGCGACAGAA CGGCTTTTTT CAAAATATGT
TCCGGAAGAT TCGAACGCAA CAAGTTCTAC TATCACACCA GGCTGAAAAA AAAGATAAGG
TTTTCCAGCC CGACTCATTT TATGGCAAAT GAGAAAAGCA TTATTGATGA CGCATGGCCC
GGGGATGTGA TCGGCCTGTA CGATAACGGC TCGCTGAAAA TCGGAGACAC GCTTACTGAA
GGCGAAGAGC TCCAGTTCCG GGGAATCCCG AGCTTTTCTC CGGAGATTTT CAAGCTGCTT
GAAAACCACG ATCCCATGAA AACAAAACAG CTCGACAAGG GAATCCGCCA GCTCACTGAA
GAAGGCGTCG CCCAGCTCTT TGTACAGCAT GGAAACCGCA AAATTGTCGG CACCGTAGGA
GAGCTGCAGT TCGATGTCAT AAAATTCCGA CTTGAACATG AATATGGCGC ACTTTGCGCT
TTCACTCCCC TTCGCTACAA GAAAGCACTC TGGGTCACCA GCGATAACAA GGAGAGTCTT
GGAGAGTTTT TGCGCCGAAA ATCCAACCTG ATCGTTTTTG ACCGGGAGGA TCATCCGGTT
TTTCTTGCCG AAAGCGAATG GATGCTGAAA ACAGCACAGG AAGACTACCC CGATATCGAA
TTTCACACCA CATCGGAATT TAAAACCGAC CTTGCCATGT AA
|
|---|
| Protein sequence | MNAELKREIS KRRTFAIISH PDAGKTTLTE KFLLFGGAIQ TAGAVKSNKI RKTATSDFME
IEKQRGISVA TSVMGFEYAG KRINILDTPG HKDFAEDTYR TLTAVDSVIL VVDCVKGVEE
QTEKLMSVCR MRHTPVIIFI NKMDREGKAP IELLDELEEK LQINTRPLSW PISQGQTFKG
VYNLYTSALN LFEANSSRIS ETLVKIQSPQ DPELEKWIPE SFCKKLREDI ALIEGVYEPF
NEELYRDGLL APVFFGSAIN NFGVKELLET FLSIAPCPYE RDARERTVFA SEEAMSGFVF
KIHANLDPNH RDRTAFFKIC SGRFERNKFY YHTRLKKKIR FSSPTHFMAN EKSIIDDAWP
GDVIGLYDNG SLKIGDTLTE GEELQFRGIP SFSPEIFKLL ENHDPMKTKQ LDKGIRQLTE
EGVAQLFVQH GNRKIVGTVG ELQFDVIKFR LEHEYGALCA FTPLRYKKAL WVTSDNKESL
GEFLRRKSNL IVFDREDHPV FLAESEWMLK TAQEDYPDIE FHTTSEFKTD LAM
|
|---|
| |