Gene Cpha266_1144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1144 
Symbol 
ID4570933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp1293161 
End bp1293802 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content52% 
IMG OID639765737 
ProductHAD family hydrolase 
Protein accessionYP_911605 
Protein GI119356961 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAATACA AACTTCTGGT TTTTGATTTT GACGGGACCT TGGCTGATAG CGAAGCGAGC 
ATTATGGAGT CTCTGCAGCT TGTCGCCCAG GATCTGGGGA TTCCGGCTTT TGACAGGGAC
GGAGCCCGGC GAAGTATCGG TTTGCCGTTG CGGCGTACAA TTGAAATGGG GCTTGGTCTC
GCTCCTGAAG AAGCTCCTGA GGCAGTTGAC CTCTACAGAA AGCGTTACAA CGAGGTTGCT
TTAGACTTGA CGCATCTGTT TCCGGGAGTG AACGAGACCC TGGACCGATT GCGGCACGAT
TACCTGCTGG CCGTCGCTTC AAGCAAGAGC ACCCAGGGGC TGTTGTTGAT GATGCGGCAT
CTCGGGATTT ATGAGATATT CTCCCTTATT TCCGGGGCTC AGGATGTGCA ACAGCCAAAG
CCAGCACCCG ATATGGTGCT GCTTGCACTG GAGTCCATGA ATATTCCGGC TCAAGAGTGC
CTGGTTGTGG GCGACACTGT TTACGATATC GAAATGGGTC AACGCGCATT CACCGATACC
TGTGCCGTCA CCTACGGCAA CCATTCAGCC GATGAACTCC GCTGCTTCAA TCCCACCTTT
ATTATTAACG CATTCCCGCA TCTCATGCAT TGTTTGGAGT GA
 
Protein sequence
MKYKLLVFDF DGTLADSEAS IMESLQLVAQ DLGIPAFDRD GARRSIGLPL RRTIEMGLGL 
APEEAPEAVD LYRKRYNEVA LDLTHLFPGV NETLDRLRHD YLLAVASSKS TQGLLLMMRH
LGIYEIFSLI SGAQDVQQPK PAPDMVLLAL ESMNIPAQEC LVVGDTVYDI EMGQRAFTDT
CAVTYGNHSA DELRCFNPTF IINAFPHLMH CLE