Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_1144 |
Symbol | |
ID | 4570933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | + |
Start bp | 1293161 |
End bp | 1293802 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639765737 |
Product | HAD family hydrolase |
Protein accession | YP_911605 |
Protein GI | 119356961 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAATACA AACTTCTGGT TTTTGATTTT GACGGGACCT TGGCTGATAG CGAAGCGAGC ATTATGGAGT CTCTGCAGCT TGTCGCCCAG GATCTGGGGA TTCCGGCTTT TGACAGGGAC GGAGCCCGGC GAAGTATCGG TTTGCCGTTG CGGCGTACAA TTGAAATGGG GCTTGGTCTC GCTCCTGAAG AAGCTCCTGA GGCAGTTGAC CTCTACAGAA AGCGTTACAA CGAGGTTGCT TTAGACTTGA CGCATCTGTT TCCGGGAGTG AACGAGACCC TGGACCGATT GCGGCACGAT TACCTGCTGG CCGTCGCTTC AAGCAAGAGC ACCCAGGGGC TGTTGTTGAT GATGCGGCAT CTCGGGATTT ATGAGATATT CTCCCTTATT TCCGGGGCTC AGGATGTGCA ACAGCCAAAG CCAGCACCCG ATATGGTGCT GCTTGCACTG GAGTCCATGA ATATTCCGGC TCAAGAGTGC CTGGTTGTGG GCGACACTGT TTACGATATC GAAATGGGTC AACGCGCATT CACCGATACC TGTGCCGTCA CCTACGGCAA CCATTCAGCC GATGAACTCC GCTGCTTCAA TCCCACCTTT ATTATTAACG CATTCCCGCA TCTCATGCAT TGTTTGGAGT GA
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Protein sequence | MKYKLLVFDF DGTLADSEAS IMESLQLVAQ DLGIPAFDRD GARRSIGLPL RRTIEMGLGL APEEAPEAVD LYRKRYNEVA LDLTHLFPGV NETLDRLRHD YLLAVASSKS TQGLLLMMRH LGIYEIFSLI SGAQDVQQPK PAPDMVLLAL ESMNIPAQEC LVVGDTVYDI EMGQRAFTDT CAVTYGNHSA DELRCFNPTF IINAFPHLMH CLE
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