Gene Cpha266_1100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1100 
Symbol 
ID4570140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp1245802 
End bp1246512 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content46% 
IMG OID639765697 
ProductABC transporter related 
Protein accessionYP_911565 
Protein GI119356921 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGACA GGATTATTGC ACAACTGATA AATGTCTCGA AATATTACGG CAGCGGAGAA 
GGTCGTGTTA CCGCGCTCAA TCATGTCAAT CTTTCTTTTT TTCGAGGAGA TATCGTCGTC
CTTGTCGGAC TGTCAGGAAG CGGCAAATCA ACCCTGCTTC ATCTTCTTGG CTGCATTGAC
AAGCAGGATG AGGGGAACGT CATCATCGAC GGCATTGATA CCTCATCAAT GAGCCTCGAA
CAACTCGCGA ATCTGCGGCT TAGCAAGATC GGGTTTGTCT TTCAGTCATT CAATTTAATT
CCGGTTCTTA CGGCTTATGA GAATGTCGAA CTCCCTCTTC TTTTTAAAGA CATGGATAAA
AAGAGTATCC GCCAAAGAGT CGATGAAGTG CTTGACGAGG TAGGGCTTCA TGACAGAAAA
CACCACTATC CAAGAGAGAT GTCTGGCGGA CAGCAGCAAA GGGTTGCCAT TGCAAGGGCT
CTGGTAAGTA AACCCGCTCT GATTCTGGCA GATGAACCGA CAGCCAATCT TGACAGTAAA
ACAGGTGCCG GGATTCTTGA TCTGTTGATG AGCCTCAACA AGAAGGAACA TATCACCATC
GTTGTCTCTT CTCATGATTC TGTCGTGCTC GACAGAATAA AAAGCGTTGT TCATATCAGG
GACGGAAAGA TAATGGTTGA CGAAACAGCT CTTCACAACC ATCTGGCCTG A
 
Protein sequence
MNDRIIAQLI NVSKYYGSGE GRVTALNHVN LSFFRGDIVV LVGLSGSGKS TLLHLLGCID 
KQDEGNVIID GIDTSSMSLE QLANLRLSKI GFVFQSFNLI PVLTAYENVE LPLLFKDMDK
KSIRQRVDEV LDEVGLHDRK HHYPREMSGG QQQRVAIARA LVSKPALILA DEPTANLDSK
TGAGILDLLM SLNKKEHITI VVSSHDSVVL DRIKSVVHIR DGKIMVDETA LHNHLA