Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_1066 |
Symbol | |
ID | 4569743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | + |
Start bp | 1207102 |
End bp | 1208250 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639765663 |
Product | geranylgeranyl reductase |
Protein accession | YP_911531 |
Protein GI | 119356887 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000111291 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATT CATATACATG CCTGGTTGTT GGTGCGGGGC CATCCGGATC GTCGGCTGCA TATACTTTTG CAAAAAATGG CATAGATGTC TGCGTTGTAG ACAAGGCTTT TTTTCCAAGA GATAAACTCT GTGGAGGGTT GTTGAGCAAA AGGACCAAAA AGAGTGTTCT GGATGTGTTT GATCTCAATT GGGATGATGT TTATGAGTAC ACGTCAAACG GAGCTCTTTT TTTTTATAAG GGTCAACAGA TAAACATGAT TGAAAATTAT GGGGAGTTAT ATTTTTGTAA TCGCAGTACG TTTGACAATA CTTTACTGGG TCTGGTGAAG TCAAAGGGGG CGGATGTTGT GTCAGGGGAT AAAGTTGAGT TTATAGATGC AGCCTCTAAA ACCTGTCTGC TGAGTTCAGG ACAGCAGATA AATTATCGTT ATCTGATCGC TGCGGACGGG GTAAATAGTC TCATAGCCCG GAATGTCACA TCCAAAAAAT TTGATAAAAG CAAGTATGCT TTTGCCGTGC AGGTCGAAAT ACAGAGGGCA GGTTACAGCC AAAACGACAT AGCAAAGCCG GAGATTTATT TTGGCGAAGT TGACTGGGGT TATGGATGGG TATTTCCTAA AAAAAACAGC TATTCGGTTG GTGTTGGCGG GCTATACTCA AAAAACAGTG ATGTTGGAAA AAAATTCAAA GAGTTCTGTT TGGCCCGAAA TCGTCAGCCG TATTCAGAGC CGTTGAAAGG GCATTATATT CCGTTTGGCA ACTATGCCCG GCATGTTGTA GCCAAAGATA TTATTCTCGT AGGAGATGCA GCGGGATTAG TTGATCCGGT AACAGGGGAG GGGATTGCAC ATGCTGTTGA GAGCGGCCAC TATGCGGCGC AGGCGGTCAT TTCAGCACTT TCAGGCAATA ATATCAGCCT TGTTGATGAG TATGAAAAAT ATTACTCGAA AATAACTCGC GAAATGGCTC GCGCAAGGAT GCTGCAATAT TTTTTGTTCT CCGGATACAC GCAATCTTTG GTTATGAAGG CTCTTTCGAG ATCAAAAACA ATGCCATATC ATTATATGGA TTTGTTATCG GGCGATATCG ATTACAGGGA TCTTTTTTTG ATCATACGAA AAAAACTGAA AAAAATTGTT TTCGGGTGA
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Protein sequence | MKNSYTCLVV GAGPSGSSAA YTFAKNGIDV CVVDKAFFPR DKLCGGLLSK RTKKSVLDVF DLNWDDVYEY TSNGALFFYK GQQINMIENY GELYFCNRST FDNTLLGLVK SKGADVVSGD KVEFIDAASK TCLLSSGQQI NYRYLIAADG VNSLIARNVT SKKFDKSKYA FAVQVEIQRA GYSQNDIAKP EIYFGEVDWG YGWVFPKKNS YSVGVGGLYS KNSDVGKKFK EFCLARNRQP YSEPLKGHYI PFGNYARHVV AKDIILVGDA AGLVDPVTGE GIAHAVESGH YAAQAVISAL SGNNISLVDE YEKYYSKITR EMARARMLQY FLFSGYTQSL VMKALSRSKT MPYHYMDLLS GDIDYRDLFL IIRKKLKKIV FG
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