Gene Cpha266_1012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1012 
Symbol 
ID4570167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp1152877 
End bp1153851 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content46% 
IMG OID639765615 
ProductPSP1 domain-containing protein 
Protein accessionYP_911483 
Protein GI119356839 
COG category[S] Function unknown 
COG ID[COG1774] Uncharacterized homolog of PSP1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTATG TTATATGCAG TTGTTTGCTT GCTGACAACA CCAACGTACG ACTCCGCCTT 
TCCCAGTTGC TGCACAATGA AATTGACAGA ATTTACGGCG ATTGTGATAA CGAAGAGCCA
TGCTCGCTCT GTGAAATAGA GCTGCAGGGG TGCCGACGGG ATTTTTTTGA AAACAGAACA
GGAGGGCCCC TTGCCATTGG AGAGCAGGTT GTTGTCGAAT CCGATGGAGG CTATGATTTC
GGAATAGTTT ACTCTACAGG AAGAATCACC CGAAAAAAAG TTAAACTCAA AGGTCTCGAC
AGCAACAATG TCGTATGGCC GACGATCCTT CGACCGGCTG ATAACGAGGA CATGAAGCTT
ATCGAGGATT GCAGAAGGCG TCAATCCGAT ATTCGTGATA TCTGTCTGAA AAAGATTCAA
AAACATGCGC TTGAACTCAA ACTTGTTGAC GTTGAACTTC GCATGGATCA GCAGAAGCTG
TCCGTCTACT ACACCTCATC GCACCGTGTC GATTTCAGAA ATCTTGTAAG GGATCTTGCC
GGTGAATTCA AGGCAAGAAT ACAGATGGTG CAGATCACTA CCCGTGAAGA AGCTCGAAGA
GCCAACGCAT TCGGCCCTTG CGGTTGCCTG CTGTGCTGCT CAAGCTGGCT GCAGAAAATT
CATGCAAACC CCTTTGCTGA AAAATCGAAC TATCATGAAA GCGCATGCAG CGAAAGTCAT
GCTTTTAACA TTACCGGATT ATGCAACCGC CCGAAATGCT GTATCGGTTA TACAAAACAG
GAATCATCAT TTCAGGATAA CCGCCAGCAG GTTGAGTTTC CTCCTGTAGG AAGCCGGTTA
TCAACTCCGG AAGGTCCGGC AATTGTCGAA AGTATCGATA CCCGCAAAAA GCTCGTCTGC
CTCTTTTACC AGAAAGGAGA GATGAGAAGG CGGTTCCCGA TAGAAAAATT CAATTCCCTG
TTTATTAAAA AGTAA
 
Protein sequence
MSYVICSCLL ADNTNVRLRL SQLLHNEIDR IYGDCDNEEP CSLCEIELQG CRRDFFENRT 
GGPLAIGEQV VVESDGGYDF GIVYSTGRIT RKKVKLKGLD SNNVVWPTIL RPADNEDMKL
IEDCRRRQSD IRDICLKKIQ KHALELKLVD VELRMDQQKL SVYYTSSHRV DFRNLVRDLA
GEFKARIQMV QITTREEARR ANAFGPCGCL LCCSSWLQKI HANPFAEKSN YHESACSESH
AFNITGLCNR PKCCIGYTKQ ESSFQDNRQQ VEFPPVGSRL STPEGPAIVE SIDTRKKLVC
LFYQKGEMRR RFPIEKFNSL FIKK