Gene Cpha266_1008 details

Gene Information

• Locus tag: Cpha266_1008
• ID: 4570162
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium phaeobacteroides DSM 266
• Kingdom: Bacteria
• Replicon accession: NC_008639
• Strand: +
• Start bp: 1145647
• End bp: 1147536
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 639765610
• Product: Fis family transcriptional regulator
• Protein accession: YP_911479
• Protein GI: 119356835
• COG category: [R] General function prediction only
• COG ID: [COG0488] ATPase components of ABC transporters with duplicated ATPase domains

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGCTTT TAACGGTTGA AGGACTTCAG AAAAAGTATG GTCTGAAGCA TTTGTTTGAG 
GATGTTTCGT TTGGAATTGA TGATCGTGAC AAGATCGGTC TTATCGGTGC GAACGGGAGC 
GGGAAGAGTA CGCTTCTGAA AATTCTTGCA GGGGTTGAAA CGCCTGACAA GGGCAAGGTT 
ATGGTGGCAA ACCAGAAGAG GATCGCCTAT CTGCCCCAGG ATTCTCCCTA TAATCCTGAG 
GATACCGTGC TGGAAGCAAT TCTGAAGTCG AGCGACAAGG TCATGGATCT TATCTATCAA 
TATGAGCTGG TCTGCAAGGA GCTGGAAACA AACCATGATG ATCCGCTGAT CGAGCGGATG 
AGTCAGCTTT CACATGAACT CGATGTAACG GGCGCATGGG AACTGGAGTC GAATGCCAGT 
ACCGTACTTG GCAAACTTGG CCTGTACGAT CTTGATGCAG TCATGGGAAC TCTTTCCGGA 
GGTCAGCGTA AACGGGTTGC TCTGGCTCAT GCTCTTGTTG TTCCGAGCGA CGGTCTCATT 
CTTGATGAAC CGACCAACCA TCTTGACGCC GACAGCGTTG AGTGGCTTGA ACAGTATATA 
AGGCGCTATC AGGGTGCTGT TCTGTTAATT ACGCATGATC GTTATTTTCT TGACCGTGTG 
GCAACGCGCA TGATCGAACT GGATGGACGG ACGGCAGTAA CCTATACCGG CGGCTATTCG 
AGTTATCTGC AGCAGAAAGC TGAACAGGAA GAACAGGCGA TCAGGGATGA CCGCAAGCGC 
CAGGCTCTTG TCCGTCAGGA ACTTGACTGG ATGAGGGGCG GATGCAAGGC TCGGACGACA 
AAACAGAAAG CGAGAATGCT TCGCGCGGAG AGTCTGGTTT ATGCTCCGAA AAAGGAGAAG 
ACGAAGGAGC TTGAGATCGG GTTTGGTGCA GGACGGCTGG GCGACAAAAT CATTGAGTTT 
CACGAAGTTT CAAAATCCTA TGACGAGAAA CTGCTCCTGC GGTCGTTTGA GTACCAGTTG 
CAGAAAGGAG ATCGTATCGG TATTATCGGG CCGAACGGTT CGGGAAAAAC CACCCTTTTT 
GATATGATTA CCGGGCGCGT ATCGCCTGAC AGCGGGCATA TCGATATTGG TAAAACGGTG 
AAAATCGGAT ACTACGATCA GCAGAGTCGC GGTCTGGACG ACTCCAAGCG GGTTATCGAG 
TATATACAGG AGCATGCCGA GCAGATCAAA ATAAAGGATG GACTGGTTTT TTCCGCATCG 
AAAATGCTTG AGCGTTTTCT CTTTGCGCCT TCAACCCAGT ACAGTTATAT CAGCACCCTT 
TCGGGAGGTG AGCGCAGGCG ACTCTATCTG CTCAAACAGC TTATCGATTC GCCCAATGTG 
CTTCTTCTTG ACGAACCAAC CAATGATCTC GATATCCCTA CACTCAGAGT GCTTGAGGAT 
TATCTCGATA CCTATACGGG TTGTCTTATC GTTGTCAGCC ATGATCGATA TTTTCTTGAT 
CGTACGGTCG AGTATATTTT TGCCTTTGAG GAGAATGGCC TTATTCGCCG TTATCCCGGT 
AACTACACCG TCTATCTTGA TCTGAAAGCT TCCGAGGCGT CAAAAAACGA GAAAAAACCG 
TTAAAAAAAG AGCCGTCGGT TTCCGTGCCC CCGAAGAAAG ACAATTCATC AAAACAGAGC 
AGGTCTGGCA GTAAGGAGAA GCGCGAACTG GAGATCCTTG AACGGTCTAT TCAGGAAGCT 
GAAAGTCAGC AGTCAGAACT TGCCGCACGT CTTGCGGCAG CCGGCAGCGA TTTTGCATTG 
GTGCAACAGC TTGGTTCGGA ACTTAATCAG GTACAGGAGA AACTGGAAAA ACAGATTTTG 
CGATGGACGG AACTTGCAGA AATGGCATAA 

 

Protein sequence

MVLLTVEGLQ KKYGLKHLFE DVSFGIDDRD KIGLIGANGS GKSTLLKILA GVETPDKGKV 
MVANQKRIAY LPQDSPYNPE DTVLEAILKS SDKVMDLIYQ YELVCKELET NHDDPLIERM 
SQLSHELDVT GAWELESNAS TVLGKLGLYD LDAVMGTLSG GQRKRVALAH ALVVPSDGLI 
LDEPTNHLDA DSVEWLEQYI RRYQGAVLLI THDRYFLDRV ATRMIELDGR TAVTYTGGYS 
SYLQQKAEQE EQAIRDDRKR QALVRQELDW MRGGCKARTT KQKARMLRAE SLVYAPKKEK 
TKELEIGFGA GRLGDKIIEF HEVSKSYDEK LLLRSFEYQL QKGDRIGIIG PNGSGKTTLF 
DMITGRVSPD SGHIDIGKTV KIGYYDQQSR GLDDSKRVIE YIQEHAEQIK IKDGLVFSAS 
KMLERFLFAP STQYSYISTL SGGERRRLYL LKQLIDSPNV LLLDEPTNDL DIPTLRVLED 
YLDTYTGCLI VVSHDRYFLD RTVEYIFAFE ENGLIRRYPG NYTVYLDLKA SEASKNEKKP 
LKKEPSVSVP PKKDNSSKQS RSGSKEKREL EILERSIQEA ESQQSELAAR LAAAGSDFAL 
VQQLGSELNQ VQEKLEKQIL RWTELAEMA