| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_0913 |
|---|
| Symbol | |
|---|
| ID | 4570546 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | - |
|---|
| Start bp | 1039869 |
|---|
| End bp | 1041575 |
|---|
| Gene Length | 1707 bp |
|---|
| Protein Length | 568 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639765508 |
|---|
| Product | sulfate transporter |
|---|
| Protein accession | YP_911385 |
|---|
| Protein GI | 119356741 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
|---|
| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor
[TIGR00815] high affinity sulphate transporter 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAAC CAAAACTTTT CACTGTTTTA CCTGAATTAA CTCCTGCCCA GCTCTCGAAA
GACATCGTTT CGGGCATCCT TGTCGGCATT GTCGCTCTTC CTCTTGCCAT TGCATTCGCC
ATTGCTTCGG GGGTTTCGCC TGAAAAAGGG CTGATCACTG CGGTTATCGG TGGTTTTATT
GTATCGTTTC TCGGAGGCAG CAGGGTGCAG ATCGGAGGGC CGACTGGCGC ATTTATCGTT
ATTCTCTACG GCATCGTTCA GCAATACGGA ATCAACGGCC TCATGATTGC AACCATGATG
GCTGGCGTCA TCCTCATCAT CATGGGTTTT GCCCAATTCG GATCACTGAT CAAGTTCATC
CCCTATCCGG TCATTGTCGG CTTTACCAGC GGTATTGCCG TTATTATTTT TTCAACCCAG
ATCAAGGATT TTTTCGGTCT TCATATTGAA ACAGTTCCAG CGGAATTTAT CGGGAAATGG
AGCGCCTACG CTCATAACAT CTCCTCACTG AACCCCCAGG CCACGGCTAT AGGCATTCTG
GCGCTTCTCT GTATTCTCTT CTGGCCAAAA GCTCTGCGTA AAATTCCCGG ATCACTCTTT
GCCATAATCC TGACAACCCT GCTCGTTCAA CAGCTCAACC TCAATGTCGA AACCATTGAA
AGCCGCTTCG GAAGCATTCC GTCAACCATT TCGGCACCAT CGTTCCCCAC TCTTGACTTC
ACAACCATCC GTCAGCTCAT TATGCCGGCA ACAACGATTG CCCTGCTTGG AGCCATTGAG
GCGCTCCTTT CAGCCGTCGT CTCTGACGGG ATGATTGGCA GCCGCCATAA ATCAAATATG
GAACTTGTCG CCCAGGGCGT CGCCAATATT GTCTCTCCGC TCTTCGGAGG TATTCCGGTA
ACCGGCGCAC TGGCGCGTAC AGCAACCAAT GTTAAAAACG GCGGCAGAAC GCCGATTGCC
GGCATCGTGC ATGCCATAAC ACTCCTGCTC ATCATGCTGC TTTTCGGCTC ATGGGCCAAG
CTGATTCCCA TGCCAACCCT TGCTGCAATT CTTATTGTCG TTGCCTGGAA CATGAGCGAA
CACCGCGTCT TCCGTCAGCT CCTGAAAAGT CCGCGCAGCG ACGTTATTGT ACTGCTCACG
ACATTCAGTC TCACGGTAGT GTTTGATCTC ACCATTGCCA TTGAGATCGG CATGCTGCTT
GCCGTCATTC TCTTTATGCA GCGAATGGCG GAACTCTCAA ATGTCGGAGT CATAACGAAG
GAACTCAAAG ACCGGGATGA GGAGGACGAT CCGAACACCA TTGTCACAAG AAAAGTACCA
CAAAGCGTTG AAGTGTTTGA ATTTAACGGA CCGTTTTTCT TCGGCGCCGC ATCAAAGTTC
AGGGATGCGA TGCACATCGT TGAAAAATCG CCGAAAATCC GCATTATCAG AATGCGTAAC
GTTCTCTCAA TCGACGCAAC AGGCCTGAAC ATGATGAAGG AGCTGCTTAC CGACTGCAAC
AAATCGGGAA CAAAGCTGAT CCTGTCCGGA GTTCATGCGC AACCACTCTT TGCCATGCAG
CAGTACGGTC TTTACGATGA TATAGGGGAA GAGAACATTT TCGGTCACAT TGATGATGCT
CTTGACCGCG CGCGCGACCT TCTCGGCCTG CCGAAAGAGG GAAGAAATCC AAATGCGACA
CCATCAGTTG AACGCGAAAA GCAATAA
|
|---|
| Protein sequence | MFKPKLFTVL PELTPAQLSK DIVSGILVGI VALPLAIAFA IASGVSPEKG LITAVIGGFI
VSFLGGSRVQ IGGPTGAFIV ILYGIVQQYG INGLMIATMM AGVILIIMGF AQFGSLIKFI
PYPVIVGFTS GIAVIIFSTQ IKDFFGLHIE TVPAEFIGKW SAYAHNISSL NPQATAIGIL
ALLCILFWPK ALRKIPGSLF AIILTTLLVQ QLNLNVETIE SRFGSIPSTI SAPSFPTLDF
TTIRQLIMPA TTIALLGAIE ALLSAVVSDG MIGSRHKSNM ELVAQGVANI VSPLFGGIPV
TGALARTATN VKNGGRTPIA GIVHAITLLL IMLLFGSWAK LIPMPTLAAI LIVVAWNMSE
HRVFRQLLKS PRSDVIVLLT TFSLTVVFDL TIAIEIGMLL AVILFMQRMA ELSNVGVITK
ELKDRDEEDD PNTIVTRKVP QSVEVFEFNG PFFFGAASKF RDAMHIVEKS PKIRIIRMRN
VLSIDATGLN MMKELLTDCN KSGTKLILSG VHAQPLFAMQ QYGLYDDIGE ENIFGHIDDA
LDRARDLLGL PKEGRNPNAT PSVEREKQ
|
|---|
| |