| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_0896 |
|---|
| Symbol | |
|---|
| ID | 4570510 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | - |
|---|
| Start bp | 1022290 |
|---|
| End bp | 1024827 |
|---|
| Gene Length | 2538 bp |
|---|
| Protein Length | 845 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639765491 |
|---|
| Product | type III restriction enzyme, res subunit |
|---|
| Protein accession | YP_911368 |
|---|
| Protein GI | 119356724 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCATA AGGAAGCCGC CGCCCGCATT AAAATCAACA AGCTGCTTGA AGCTTCCGGT
TGGCGGTTCT TTGCTGAAGG GAATCAACGG GCCAACATTC AGCTTGAGCC AAAAGTTACG
ATAACAACGC AGGACATTGA CATTCTCGGC GAGAACTTCG AAAAAGTCAC CAGAGGATTT
ATTGACTTTC TTCTTCTCAA CGACAAAGGC TTTCCCTTCA TCGTCCTTGA AGCGAAATCG
GAAGAGAAAA ATCCGCTTGC AGGCAAAGAA CAATCGAGGA AATACGCACG CTCGCAGAAC
TGCCGGTTTG TCATTCTCTC GAATGGCAAC ATGCACTATT TCTGGGATCT TGAGCGGGGA
AATCCCTACA TCATCACATC CTTTCCAACT CCGGACTCAG TCATCGGCTA TCAGAAAGTA
TCGAGTGACC CTCAGTGCAT CATTGACGAG CAGGTTGGAG ATGATTATAT CGCTCTGACA
CAGCGCCCGA ACTATTTCGC AGAGGCGGCA TGGAAGAATG AAGAAGAACG TTCCGATTAC
ATTCAATCGA ACAAGCTCAG GTTCCTGCGA CCCTACCAGT TGAAAGCCAT TGTTGCCCTG
CAGAAGGCTG TCAAGGATGG ACAGGATCGT TTTCTTTTTG AAATGGCTAC AGGCACAGGC
AAAACACTTG TTGCTGCAGC AGTGATCAAG CTCTTTCTGA AAACCAGCAA CTCCCGCCGT
GTTCTTTTTC TTGTTGATCG CCTCGAACTT GAAGATCAAG CGAAGAAATC TTTTGCAGCC
GCGCTTGCCA ACGATTATAA AACCGTTGTC TACAAAGAGA ATCGTGACGA TTGGCGTAGA
GCGGAAATAG TTGTTACCAC CGTTCAGTCA CTGCTTTTCA ACAACAAATA CCAGAGGCTC
TTTTCGCCAA CAGATTTCGA CCTTGTCATC TCCGACGAAG CCCATCGCTC CATTGGCGGA
AATGCACGTG CCGTTTTCGA TTACTTTATC GGTTACAAGC TTGGGTTGAC TGCAACACCG
CGAGACTACC TCAAGAAATT TGACACAACC AGCAACGCAT CAAAAGATCC GCGCGAGCTT
GAACGCCGGA TGCTGCTCGA CACCTATCGA ACCTTTGGAT GCGACAACGG TCAACCAACC
TTCCGTTACT CATTGCTTGA CGGAGTAAAA GAGGGCTATC TCATCAACCC TACGGTGGTT
GATGCAAGAA CAGGCATTAC TACGGAGCTT CTTTCGGACA AAGGATTCAT TGTTACCATT
ACCGACAACG AAGGAGAAAA TCAGGAAGAG GCATACAAAA TCCGGGAGTT TGAAAAACGC
TTCTTTTCTG ACGCCACAAA CACACTGTTT TGCAAAACCT TTCTTGAATA TGCCCTGCGT
GATCCGGTCA GTGGCGAGAT AGGGAAATCA ATCATCTTTG CAGTCAGTCA GAACCATGCA
GCCCGCCTCA CCCAGGTGCT CAACCTGATT GCCGACAGAA TGTTCCCCGG CAGATACCAG
TCAGACTTTG CTGTGCAGGT AACGTCACAA ATCCCAGACG CCCAGCAGTT TACCATCAAC
TTTACCAACA ACAACCTGCT TGGTTCCGGT AACTTCATGG ATACCTATCG GACAAGCAAG
GCCCGTGTCT GCGTTACTGT CGGTATGATG ACCACCGGTT ACGACTGCCC TGATATTCTC
AACCTTGGTC TGTTTCGGCC CATCTTCTCG CCGACAGACT TCATCCAAAT AAAAGGTCGC
GGCACCAGAA AGCATCTTTT TCTTGATCAG CTTTTTGATG ATAACGTGAG CAGCAGTGTT
CGGCATCCAC AAAAGAGCGC CTACATGCTC TTCGATTTCT TTGCCAATTG CGAATACTTC
GAAGAGAAAT TCAAATACGA CAAGAAGATC AAGCTTCCCG AACAGCGGTC CAAAGGCGGG
GATGAACCTG ATACGGGAAC CGGTGCCATA CCTGAAATCT ATGAACACCT TGGTGAAGAT
ATTCTCGCTT CTGTAAAGGA AGAGACAATC GGCGCTGAGG GGATGAAAAT CGACAGGATG
TTTTTCGAGC GCTTTGAAGA TGTCATTCTC GAAAACGACT TTATCGCCGC AAGCGTTGAA
GCCGGCCAGT GGGACAGGGT TATTGATTAT GTCAACCATG AAGTGTTCGA TAAACCTCAC
GAGTACTATA CCCTTGACAA ACTCCGAAAA GCCGCAGCCG TTGACCGTCG ATTGTCACTC
CGCGAAATCC TTGAAAAAAT CTTTGGTTTG ATTCCGCGAT TCAAATCAAA AGACGAGCTG
CTCGAAGAGG AGTTCAGCAA ATTCGTTGCC GATTACAAGC CCGAAGAGGC GGAAGCAATC
CCTGCCATGA AGCACTATTT CAAGGCCTAT GTTACCAACG ACAAGGTTCG CCACATCATC
AACACAAAAC ATTTCACCGA ACTGGCAACC AATCCTGTAT TTTCAACCCG TGACCTGAGA
GCTGTCCCCG ACAAATACCG CGTCATTATT CCCGAATACA TAAAAGACTA CGTCTCGCTC
AATCAATTTG CAGCCTAA
|
|---|
| Protein sequence | MVHKEAAARI KINKLLEASG WRFFAEGNQR ANIQLEPKVT ITTQDIDILG ENFEKVTRGF
IDFLLLNDKG FPFIVLEAKS EEKNPLAGKE QSRKYARSQN CRFVILSNGN MHYFWDLERG
NPYIITSFPT PDSVIGYQKV SSDPQCIIDE QVGDDYIALT QRPNYFAEAA WKNEEERSDY
IQSNKLRFLR PYQLKAIVAL QKAVKDGQDR FLFEMATGTG KTLVAAAVIK LFLKTSNSRR
VLFLVDRLEL EDQAKKSFAA ALANDYKTVV YKENRDDWRR AEIVVTTVQS LLFNNKYQRL
FSPTDFDLVI SDEAHRSIGG NARAVFDYFI GYKLGLTATP RDYLKKFDTT SNASKDPREL
ERRMLLDTYR TFGCDNGQPT FRYSLLDGVK EGYLINPTVV DARTGITTEL LSDKGFIVTI
TDNEGENQEE AYKIREFEKR FFSDATNTLF CKTFLEYALR DPVSGEIGKS IIFAVSQNHA
ARLTQVLNLI ADRMFPGRYQ SDFAVQVTSQ IPDAQQFTIN FTNNNLLGSG NFMDTYRTSK
ARVCVTVGMM TTGYDCPDIL NLGLFRPIFS PTDFIQIKGR GTRKHLFLDQ LFDDNVSSSV
RHPQKSAYML FDFFANCEYF EEKFKYDKKI KLPEQRSKGG DEPDTGTGAI PEIYEHLGED
ILASVKEETI GAEGMKIDRM FFERFEDVIL ENDFIAASVE AGQWDRVIDY VNHEVFDKPH
EYYTLDKLRK AAAVDRRLSL REILEKIFGL IPRFKSKDEL LEEEFSKFVA DYKPEEAEAI
PAMKHYFKAY VTNDKVRHII NTKHFTELAT NPVFSTRDLR AVPDKYRVII PEYIKDYVSL
NQFAA
|
|---|
| |