| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_0856 |
|---|
| Symbol | |
|---|
| ID | 4570450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | + |
|---|
| Start bp | 981215 |
|---|
| End bp | 981892 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 639765454 |
|---|
| Product | MotA/TolQ/ExbB proton channel |
|---|
| Protein accession | YP_911331 |
|---|
| Protein GI | 119356687 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | [TIGR02796] TolQ protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.339673 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGACT CAAGAGTCGG AATTTTTTTC ATGCTTTCTG ATGCCGGTCC GGCAGTGCTT
GCCGTTCTCA TTGTTTTGCT TGGTTTTTCA GTGGTATCGT GGGCTATCAT TGCGTTCAAG
TTCGGATATG TCAACAAGTC CATAAAAGAG TCCAGAGAGT TTCTCGATTG TTTTTTCGAG
TTATCCAGTG TTGACAAGAT TTTTGTTGAA AGTGAAAAGT ACAGGAGCAG TTCGCTTGCA
AGGGTTTTTC GTTCCGCTTA TATCGAATAT CGGGCACTGG TTGAACGTAA TGGTGAGAGG
CATGTTGAAG AGCGCGTTGC CCGTGCGGTG AAAAGGGAGG TAAATGCCGA GAGCAAAAGA
CTGGTTTATC TTGTTCCTTT TCTTGCAACG GTCGGCAATA CCGCTCCGTT TATTGGACTG
TTTGGCACAG TATGGGGCAT TATGACCTCA TTTCAGCAGA TAGGACTGAC ACAGTCAGCC
TCCCTTGCTT CAGTCGCACC GGGTATATCC GAAGCACTGG TAGCAACTGC TGCCGGACTT
GTTGCAGCTA TTCCTGCTGT TATAGCCTAT AATTATTTCA CTCAGCAGAT CGCTCTCATC
GATCGTGATC TTGAGGATTT TTCAGGTGAG TTTGTTACAG CATGTATCCG GAACATACAG
AAAGGGTCTG TATCATGA
|
|---|
| Protein sequence | MPDSRVGIFF MLSDAGPAVL AVLIVLLGFS VVSWAIIAFK FGYVNKSIKE SREFLDCFFE
LSSVDKIFVE SEKYRSSSLA RVFRSAYIEY RALVERNGER HVEERVARAV KREVNAESKR
LVYLVPFLAT VGNTAPFIGL FGTVWGIMTS FQQIGLTQSA SLASVAPGIS EALVATAAGL
VAAIPAVIAY NYFTQQIALI DRDLEDFSGE FVTACIRNIQ KGSVS
|
|---|
| |