Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_0843 |
Symbol | |
ID | 4570380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | + |
Start bp | 964638 |
End bp | 966056 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639765441 |
Product | aromatic hydrocarbon degradation membrane protein |
Protein accession | YP_911318 |
Protein GI | 119356674 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2067] Long-chain fatty acid transport protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTCAGTA AATTACTTAT TGGTCTGACT GCTCTGGTTG CTCTTTCGGG CGTATCGCCG GCGTTTGCCA CGAATGGTAT GAATCTTGAG GGCTACGGCG CAAAATCTCA TGCTCTCGGA GGTGCAAGCA TGGCTTTTGA TACGGGTAAC TCAGCGGTCA TGAACAATCC TGCAACCCTT GGCATGATGA AGGAAGGGAA GGAGGAAATT GGTATCGGTA TCAGGGGACT GCATCCTGAT GTTTCGCTTT CGTATGGGCC AATGACAGAA AACTCTGAAG GAACCGGGTA CTATATGCCT TCTCTTTCTT ACATGAGAAA AGATGGCAAT ATAGCCTGGG GCGTTGCCAT GCTTGCACAG GGAGGAATGG GTACGGAGTA TGGTGATGAT TCTCCTCTTT TCATGTTTGG CAGATCGTAT GGAAATTCTC TTGTGCCGTT GAGTGGAAAG GAGATTCGTT CTGAAGTTGG TGTGGGAAGG GTGATGTTCC CTCTGGCATG GAATATTACA GACAACACAA CCATCGGCTT ATCCCTTGAT TTTATCTGGG CGAGTATGGA CTTGCAGATG GATATGGACG GCAAGCATTT TAAAGGGATG ACTCAGGGAG TGGGCGGATC GGTAAGCGGA ACGATGTATA ATACTTTGGG TTCCATGATG CAGTCCGGCG GTGTTACCGA TATCAATTAC ATGCGCTATG ATTTTACAAA TGGCAGCCCT TTTATCGGTG AAGCGGCAGG GTTCGGAACA GGTTTCAAAA TCGGTATGGT TCATCGGTTC AGCAAGATGC TGACGGTCGG GGGTAGTTAC CATTCGAGAA CGTGGATATC AGATCTTGAA ACGTCCGGCG CCTCTCTTTC ATTTTCGGGA GTGGATGCAA TGAATAATAC GTTCACGCAG TCAGTCAGCG GAACCATCAA GGTCAGGGAT TTTGAATGGC CGGCTGTTTT TGCCGCAGGG TTTGCTCTTT ATCCCGGTGA TCGCTGGATG ATTGTTGGAG ATATCAAACA GATTGACTGG TCGTCGTCAA TGAGTAAGTT TTCCACCACG TTTACTGCTG ACAGTTCGCC TTCGAATGGT CCGTTTATCG GCAAAAGGCT CGATGTCGAT ATGCAACAGG AGTGGAAAGA TCAGACTGTT TTTTCGATAG GCGCTCAATA CAAGGCAACA GAGCGGCTTT CACTTCGCGC CGGAGCGAGT TTCGCCACAA ATCCAGTACC GGATGATTAT CTCAATCCTT TGTTTCCGGC TATTACAACA AACCATTACA CGGCAGGGTT TGGTTATCGG CTTTCTGATA AATCCTCTTT TGCCACGGCT GTTGCCTGGG CTCCCGAGGT GTCAGCAACC AATGCGGATG GTATGGTTAT CAGGCACGGC CAGATGAACT GGTCATTGAA CTTTACTCAT GAGTTATAG
|
Protein sequence | MFSKLLIGLT ALVALSGVSP AFATNGMNLE GYGAKSHALG GASMAFDTGN SAVMNNPATL GMMKEGKEEI GIGIRGLHPD VSLSYGPMTE NSEGTGYYMP SLSYMRKDGN IAWGVAMLAQ GGMGTEYGDD SPLFMFGRSY GNSLVPLSGK EIRSEVGVGR VMFPLAWNIT DNTTIGLSLD FIWASMDLQM DMDGKHFKGM TQGVGGSVSG TMYNTLGSMM QSGGVTDINY MRYDFTNGSP FIGEAAGFGT GFKIGMVHRF SKMLTVGGSY HSRTWISDLE TSGASLSFSG VDAMNNTFTQ SVSGTIKVRD FEWPAVFAAG FALYPGDRWM IVGDIKQIDW SSSMSKFSTT FTADSSPSNG PFIGKRLDVD MQQEWKDQTV FSIGAQYKAT ERLSLRAGAS FATNPVPDDY LNPLFPAITT NHYTAGFGYR LSDKSSFATA VAWAPEVSAT NADGMVIRHG QMNWSLNFTH EL
|
| |