Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_0830 |
Symbol | |
ID | 4570367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 942706 |
End bp | 944067 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639765428 |
Product | zeta-carotene desaturase |
Protein accession | YP_911305 |
Protein GI | 119356661 |
COG category | [S] Function unknown |
COG ID | [COG3349] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02731] phytoene desaturase [TIGR02732] carotene 7,8-desaturase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.762196 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAACAG CTATTTTCGG AGCAGGAGTT GCAGGGCTCA GTGCAGCAAT AGAACTGGTC GAACGCGGCC ATACCGTCGA ACTATATGAA AAACGAAAGG TACTCGGCGG CAAGGTTTCT GTATGGAAAG ATAACGACGG CGATTCCATC GAGTCGGGCC TGCATATCGT TTTTGGTGGG TACGCCCAGC TTCAGAACTA TCTGAAACGG GTTGGAGCTG CCGATAACTA CTCATGGAAA GCCCACTCCC TGATCTATGC CGAACCGGAC GGAAAACAAT CCTTCTTCAA AAAAGCAAAC CTTCCAAGCC CCTGGGCCGA AGTGGTTGGA GGACTTCAGA CTGATTTTCT CACCATGTGG GACAAGATTT CGCTCCTCAA GGGGCTTTAC CCTGCTCTGG CCGGTAACGA AGCGTATTTC CGCAGCCAGG ATCATATGAC CTATTCGGAA TGGCACAGAA AAAGAGGCGC CTCTGAACAC TCGCTTCAGA AACTATGGCG CGCTATTGCC CTTGCCATGA ACTTCATTGA ACCGAATGTG ATCAGCGCTC GTCCGATGAT CACCATTTTC AAGTATTTCG GTACCGATTA TGAAGCGACG AAATTTGCGT TTTTCAAAAA GAACCCGGGC GATTCAATGA TTGAGCCGAT GCGCCAGTAT ATCCAGAGCA AAGGCGGCCG GATTTTCGTT GATGCAAAGC TTAACCGGTT CGAACTCAAC AGCGATGAAA CCGTCAAACA TGCCGTTCTT CAGGATGGGC AGATCATCGA AGCCGATGCG TTCATTTCAG CCCTTCCCGT GCACACGGTT AAAAAAATCA TTCCCAGGCC ATGGCTTGCC CACAAGTATT TCAGGAACCT CCATGAATTT CAGGGAAGCC CTGTTGCAAA CTGCCAGCTC TGGTTTGACC GAAAAATCAC TGATACGGAT AATCTCATGT TTTCACAGGG AACGATTTTT GCAACCTTTG CCGATGTTTC GATCACCTGT CCTGATGATT TTCAGAAGGG AAACGGCACA GCAAATGGAG GCAGCGTCAT GAGCCTTGTG CTTGCGCCGG CACACCAACT GATGGATATG CCTAACGAGG TCATAACGGA ACTGGTCATG AACGACATTC ACGACCGCTT TCCGGCATCA CGCCAGGCCA AGCTCCTGAA ATCAACCATC GTCAAGATTC CTCAGTCAGT ATATAAGGCT GTACCCGATG TCGACAAGTT CCGCCCCGAC CAGATAAGCC CGGTGAAAAA TTTCTTCCTC GCAGGTGACT ATACCGATCA GCACTATCTC GCATCAATGG AAGGCGCTGC CCTGAGCGGA AAACTGGTGG CCGAAAAACT TCACGCAAAA TTCGGATCCT GA
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Protein sequence | MKTAIFGAGV AGLSAAIELV ERGHTVELYE KRKVLGGKVS VWKDNDGDSI ESGLHIVFGG YAQLQNYLKR VGAADNYSWK AHSLIYAEPD GKQSFFKKAN LPSPWAEVVG GLQTDFLTMW DKISLLKGLY PALAGNEAYF RSQDHMTYSE WHRKRGASEH SLQKLWRAIA LAMNFIEPNV ISARPMITIF KYFGTDYEAT KFAFFKKNPG DSMIEPMRQY IQSKGGRIFV DAKLNRFELN SDETVKHAVL QDGQIIEADA FISALPVHTV KKIIPRPWLA HKYFRNLHEF QGSPVANCQL WFDRKITDTD NLMFSQGTIF ATFADVSITC PDDFQKGNGT ANGGSVMSLV LAPAHQLMDM PNEVITELVM NDIHDRFPAS RQAKLLKSTI VKIPQSVYKA VPDVDKFRPD QISPVKNFFL AGDYTDQHYL ASMEGAALSG KLVAEKLHAK FGS
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