Gene Cpha266_0815 details

Gene Information

• Locus tag: Cpha266_0815
• Symbol: smpB
• ID: 4570313
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium phaeobacteroides DSM 266
• Kingdom: Bacteria
• Replicon accession: NC_008639
• Strand: -
• Start bp: 928494
• End bp: 928967
• Gene Length: 474 bp
• Protein Length: 157 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 639765413
• Product: SsrA-binding protein
• Protein accession: YP_911290
• Protein GI: 119356646
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0017945
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTCAAAAA AACAACAGCC GCAAACCTTT GTGCAGGCGA TCCATAATCG AAAAGCCCGC 
TTTGAATTTC ATATTCTCGA AACCATGGTG GCCGGTATCG AACTGCTTGG CAGCGAAGTA 
AAATCGGTTC GTCAGGGAAA GGCAAGCCTG AATGAAAGCT ACGCCATGAT CCATCACGGT 
GAGGTATGGC TGGAGAATAT GCAGATTACC CCTTATGAGC ACAACCATCT CGACACGCTT 
GAAGCGAAGC GAAGCCGGAA ACTGCTCCTT AACCGGGAGG AGATCAGAAA ACTTGAAACA 
AAAATCAATG AGAAGGGATT GACCCTGGTA CCATTGAAAG CTTTTTTCAA TAATCGCGGC 
ATTCTGAAGA TCGAAATTGC TCTGGCAAAA GGCAAAAAAC TCTACGATAA ACGCGAAACC 
ATCAAATCAA GAGATGCTGA ACGGCAACTG CAGCAACTGA AAAAAACCTA TTAA 

 

Protein sequence

MSKKQQPQTF VQAIHNRKAR FEFHILETMV AGIELLGSEV KSVRQGKASL NESYAMIHHG 
EVWLENMQIT PYEHNHLDTL EAKRSRKLLL NREEIRKLET KINEKGLTLV PLKAFFNNRG 
ILKIEIALAK GKKLYDKRET IKSRDAERQL QQLKKTY