Gene Cpha266_0775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_0775 
Symbol 
ID4570022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp882925 
End bp884355 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content58% 
IMG OID639765370 
ProductRND efflux system outer membrane lipoprotein 
Protein accessionYP_911251 
Protein GI119356607 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACTA AGCTGCTGCT TCCTTTATGC CTGGCAGCAA CCACCCTGAC GGCCTGTTCG 
CTTGAGCCTG CTTATGTACG CCCAACGGCA CCCGTCACCA CGCAGTGGCC GGTGGCTTCC
GGAATCGGGA CAACGACCTC CACGGCACCG GACTCCGGAG GACAGCCGCG TACCACCGAT
ATCGGATGGC GGAGCATGTT CAGGTCGCCA AAACTGCAAA GCCTTATCGA AGAATCACTT
GCCAACAACC GCGACCTGAG GATAGCCACC CTCAACATCG AGGTAGCCCG CAACACCTGG
CGCATCCAGC GTTCGGATCT CCTTCCATCG ATTAACGCCT CGGGAAGCTT CACACGCCAG
GAGTTATCAA AAAGCACGAG CGGCACCGGA AATAAGGAAA TCACCTCGAC ATATACCGCA
AACATCGGCA CGACGGCATA TGAACTGGAC CTTTTCGGCC GTGTACGCAG CCTCAGTAAT
CGCGCCATAA ACCAGTATCT TGCTACCGAA GAGGGCCGCA AAGCCGCCCA GACAAGCCTG
ATCGCTGAAG TCGCCAACGC CTATCTCACC TACCTTGCCG ATGTCGAACT GCTCCGATTG
ACCGAAAGCA CGCTCAGGAC AAGGCAGGAT GCGTACGATC TCATCAAACG CAGCTACGAT
TTAGGGGCAA AGTCCCGACT CGATGTAGCA CAGTCCGCAA CACTGGCAGA ATCGGCCCGA
GCAAGCCGTG CGCAATATCA ACGTCAGGTG GAACAGGACA AGAACGCCCT GACCCTGCTG
GTCGGAAAGG AGATAGATCC GAAGCTCCTT GAACCCCAGC GCCTGACCGA TGTCCAGGTG
CTGGACACGC TCCCCGCAGG CATTCCCTCC GTCGTCCTGC TCGATCGACC GGACGTACGG
CAGGCGGAAT ACGCACTGAA GGCAGAAAAC GCCAACATCG GAGCAGCACG GGCTTTATTC
TTCCCCAGCA TAAGTCTTAC CGGCTCAACC GGGTTCGCCA GCGCCAGCCT GTCGGATCTG
TTCGTGACCC GATCAAGCGG TATTTGGAGC TTCGCCCCGC AGATAACGCT CCCGATCTTC
CAGAGCGGCC GTTTGCGCGC CAACCTCAAA CTGGCTGAAA CCAACCGGGA TATTGCCGTC
GCCAAATACG AAAAAGCTAT ACAGACCGCA TTCCGGGAGG TCTCCGACGC ACTGGTCGCC
CGAGCGACCT ACACCGAACA GTTGCATGCC CAGCGAGCTC TGGTCACAGA GAGCGATCAA
GCCCGGACCA TCACGAAAGC GCGTTACGAC CATGGCATCG ACAGCTATTT CGCGCTGCTT
GACGCCCAAC GCTCCCTTTT CGAGGCTCAG CAGAACGAAA TTCTGATCCA TCAGCAGACT
CTTGCCAACC TGATCGACCT GTACAAAGCC CTCGGAGGCG GGTGGCAATG A
 
Protein sequence
MNTKLLLPLC LAATTLTACS LEPAYVRPTA PVTTQWPVAS GIGTTTSTAP DSGGQPRTTD 
IGWRSMFRSP KLQSLIEESL ANNRDLRIAT LNIEVARNTW RIQRSDLLPS INASGSFTRQ
ELSKSTSGTG NKEITSTYTA NIGTTAYELD LFGRVRSLSN RAINQYLATE EGRKAAQTSL
IAEVANAYLT YLADVELLRL TESTLRTRQD AYDLIKRSYD LGAKSRLDVA QSATLAESAR
ASRAQYQRQV EQDKNALTLL VGKEIDPKLL EPQRLTDVQV LDTLPAGIPS VVLLDRPDVR
QAEYALKAEN ANIGAARALF FPSISLTGST GFASASLSDL FVTRSSGIWS FAPQITLPIF
QSGRLRANLK LAETNRDIAV AKYEKAIQTA FREVSDALVA RATYTEQLHA QRALVTESDQ
ARTITKARYD HGIDSYFALL DAQRSLFEAQ QNEILIHQQT LANLIDLYKA LGGGWQ