Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_0710 |
Symbol | uvrC |
ID | 4569884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 809697 |
End bp | 811592 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639765308 |
Product | excinuclease ABC subunit C |
Protein accession | YP_911189 |
Protein GI | 119356545 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.314555 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATAGTA ATCCACTCCA CCATAGCAAT CCTCCGGTCG GAAGCCTTCC TCTGGATAAA GTCGCCTCGC TGCCCTCCTC GCCGGGGGTT TACCAGTTCA AAAATGCACA GGGCCGGGTT ATTTACATCG GCAAGGCAAA AAACCTGAGA AACCGCGTAC GATCCTATTT CAGAAACCCG CAGCAGCTTT TCGGTAAAAC ACTGGTCATG GTCGGCAAAA TTGCCGATAT CGAAGTTATC ATCACCTCAT CGGAGGTTGA GGCGCTGATC CTTGAAAACA ATCTCATCAA GGAGCTCAAA CCACGCTACA ATGTTAACCT GAAAGATGAC AAAACCTATC CCTATCTGGT TATCACCAAT GAACCATTTC CGAGGATTCT CGTTACCAGA CAGGTTAAAA AGGATGGATC AACCTGGTTT GGCCCCTATA CCGAAGCACG GCAACTTCGG TCGATTCTTG ATTTCATAGG TTCAATCTTT CCGATAAGAA GCTGCAAATT AAGGCTCTCC CCGGAAAATA TTTCCCGAGG GAAATTCAAG GTCTGCCTCG ATTACCACAT TCACAAATGC AAGGGTCCCT GCGAAGGTTT GCTCACAGAA GAGGAGTATC TCCTGATGAT CGTCGAAATC ACTCGTCTTC TGAAAGGAAA AACATCGGCA ACCATCCGCT CGCTCAACGA GAGAATGCTC TCTTTTGCCA AAGAGCTGAA GTTTGAACAG GCCGCTGAAT TAAAAACGCA GATCGACAGC CTTAAACGAT ATGCTGAACG ACAAAAAGTG GTCACAAGCG ACACTCTCGA CCGCGATGTA TTTGCCGTTG CTTCCCGAAA TGATGACGGA TGTGGCGTGG TTTTTAAAAT CCGTGAAGGG AAACTGCTCG GTTCCGAACG ACTCTACATG AACAACACCG AAGGGGTATC GGTGCAGGAT CTTCTTGCCC GCGTTGTTGA ACGATACTAT CTCGAAACCT GCAATCTTCT GCCTGACGAA ATTTTTCTGC AGACAGAGCT TCCTGCTGAA GAAAAAGAGA CGCTGGAAAA CCTTCTCATC TCGAAAATAA GCGCAGAGGG CAAACAGAAA AGAACCATTC GCCTGACAGT ACCGATTATC GGCGAAAAAG CACATCTGAT ACAGCTTTGT CGGGAGAATG CCCGTCACCA TCTTGAAGAG TATCTGATAC AGAAGCAGAA ACGGGGCGAA GCATTACGGG AACACAGTGG CCTGATTGCC CTTGCGGAAC TCCTGCATCT TCCGAAAACA CCCAACCGTA TTGAGTGCTT TGACAACTCT CATTTTCATG GAACCGATTA TGTCAGCTCC ATGGTCGCTT TTGTTCATGG AAAAGCAAAA AAATCAGACT ACAGAAAATT CAAACTTAAA ACCGTTCAGG GATCCGATGA CTATGCTGCC ATGCATGAAG TATTGACCCG ACGATACAGC GGAACCCTTT CCGTAGAACT TCCGCTTCCC GACCTTATCG TTGTGGACGG AGGGAAGGGA CAGCTCTCCA CGGCAGTCAA GGTTCTTGTT TCGCTTAAAC TCGACATCCC GGTCATCGGA CTGGCAAAAC GCATTGAGGA GATCTTCACG CCGCACACCA GCGACCCCTT CAATCTCCCC AAAACCTCTC CTGCTCTGAA ACTTATCCAG CAGCTCCGGG ATGAAGCGCA CCGTTTTGCC GTAACCTATC ACCGCAAGCT TCGAACTGAG AGAACCCTTG AAACAGAGCT TACCACAATC CAGGGAATAG GCGAAAAAAC AGCACAGAAG CTGCTCAGGC ATTTCGGCTC GGTCGACCTG ATCAGAACGG CTGGAGTCGA TGAACTCAGG GCTGCGGCAG GAAACAAAAC CGCAGCCCTT CTTTACCGGT TCTACCATCC CCTCGAAGAG GGATAA
|
Protein sequence | MDSNPLHHSN PPVGSLPLDK VASLPSSPGV YQFKNAQGRV IYIGKAKNLR NRVRSYFRNP QQLFGKTLVM VGKIADIEVI ITSSEVEALI LENNLIKELK PRYNVNLKDD KTYPYLVITN EPFPRILVTR QVKKDGSTWF GPYTEARQLR SILDFIGSIF PIRSCKLRLS PENISRGKFK VCLDYHIHKC KGPCEGLLTE EEYLLMIVEI TRLLKGKTSA TIRSLNERML SFAKELKFEQ AAELKTQIDS LKRYAERQKV VTSDTLDRDV FAVASRNDDG CGVVFKIREG KLLGSERLYM NNTEGVSVQD LLARVVERYY LETCNLLPDE IFLQTELPAE EKETLENLLI SKISAEGKQK RTIRLTVPII GEKAHLIQLC RENARHHLEE YLIQKQKRGE ALREHSGLIA LAELLHLPKT PNRIECFDNS HFHGTDYVSS MVAFVHGKAK KSDYRKFKLK TVQGSDDYAA MHEVLTRRYS GTLSVELPLP DLIVVDGGKG QLSTAVKVLV SLKLDIPVIG LAKRIEEIFT PHTSDPFNLP KTSPALKLIQ QLRDEAHRFA VTYHRKLRTE RTLETELTTI QGIGEKTAQK LLRHFGSVDL IRTAGVDELR AAAGNKTAAL LYRFYHPLEE G
|
| |