Gene Cpha266_0710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_0710 
SymboluvrC 
ID4569884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp809697 
End bp811592 
Gene Length1896 bp 
Protein Length631 aa 
Translation table11 
GC content49% 
IMG OID639765308 
Productexcinuclease ABC subunit C 
Protein accessionYP_911189 
Protein GI119356545 
COG category[L] Replication, recombination and repair 
COG ID[COG0322] Nuclease subunit of the excinuclease complex 
TIGRFAM ID[TIGR00194] excinuclease ABC, C subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.314555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAGTA ATCCACTCCA CCATAGCAAT CCTCCGGTCG GAAGCCTTCC TCTGGATAAA 
GTCGCCTCGC TGCCCTCCTC GCCGGGGGTT TACCAGTTCA AAAATGCACA GGGCCGGGTT
ATTTACATCG GCAAGGCAAA AAACCTGAGA AACCGCGTAC GATCCTATTT CAGAAACCCG
CAGCAGCTTT TCGGTAAAAC ACTGGTCATG GTCGGCAAAA TTGCCGATAT CGAAGTTATC
ATCACCTCAT CGGAGGTTGA GGCGCTGATC CTTGAAAACA ATCTCATCAA GGAGCTCAAA
CCACGCTACA ATGTTAACCT GAAAGATGAC AAAACCTATC CCTATCTGGT TATCACCAAT
GAACCATTTC CGAGGATTCT CGTTACCAGA CAGGTTAAAA AGGATGGATC AACCTGGTTT
GGCCCCTATA CCGAAGCACG GCAACTTCGG TCGATTCTTG ATTTCATAGG TTCAATCTTT
CCGATAAGAA GCTGCAAATT AAGGCTCTCC CCGGAAAATA TTTCCCGAGG GAAATTCAAG
GTCTGCCTCG ATTACCACAT TCACAAATGC AAGGGTCCCT GCGAAGGTTT GCTCACAGAA
GAGGAGTATC TCCTGATGAT CGTCGAAATC ACTCGTCTTC TGAAAGGAAA AACATCGGCA
ACCATCCGCT CGCTCAACGA GAGAATGCTC TCTTTTGCCA AAGAGCTGAA GTTTGAACAG
GCCGCTGAAT TAAAAACGCA GATCGACAGC CTTAAACGAT ATGCTGAACG ACAAAAAGTG
GTCACAAGCG ACACTCTCGA CCGCGATGTA TTTGCCGTTG CTTCCCGAAA TGATGACGGA
TGTGGCGTGG TTTTTAAAAT CCGTGAAGGG AAACTGCTCG GTTCCGAACG ACTCTACATG
AACAACACCG AAGGGGTATC GGTGCAGGAT CTTCTTGCCC GCGTTGTTGA ACGATACTAT
CTCGAAACCT GCAATCTTCT GCCTGACGAA ATTTTTCTGC AGACAGAGCT TCCTGCTGAA
GAAAAAGAGA CGCTGGAAAA CCTTCTCATC TCGAAAATAA GCGCAGAGGG CAAACAGAAA
AGAACCATTC GCCTGACAGT ACCGATTATC GGCGAAAAAG CACATCTGAT ACAGCTTTGT
CGGGAGAATG CCCGTCACCA TCTTGAAGAG TATCTGATAC AGAAGCAGAA ACGGGGCGAA
GCATTACGGG AACACAGTGG CCTGATTGCC CTTGCGGAAC TCCTGCATCT TCCGAAAACA
CCCAACCGTA TTGAGTGCTT TGACAACTCT CATTTTCATG GAACCGATTA TGTCAGCTCC
ATGGTCGCTT TTGTTCATGG AAAAGCAAAA AAATCAGACT ACAGAAAATT CAAACTTAAA
ACCGTTCAGG GATCCGATGA CTATGCTGCC ATGCATGAAG TATTGACCCG ACGATACAGC
GGAACCCTTT CCGTAGAACT TCCGCTTCCC GACCTTATCG TTGTGGACGG AGGGAAGGGA
CAGCTCTCCA CGGCAGTCAA GGTTCTTGTT TCGCTTAAAC TCGACATCCC GGTCATCGGA
CTGGCAAAAC GCATTGAGGA GATCTTCACG CCGCACACCA GCGACCCCTT CAATCTCCCC
AAAACCTCTC CTGCTCTGAA ACTTATCCAG CAGCTCCGGG ATGAAGCGCA CCGTTTTGCC
GTAACCTATC ACCGCAAGCT TCGAACTGAG AGAACCCTTG AAACAGAGCT TACCACAATC
CAGGGAATAG GCGAAAAAAC AGCACAGAAG CTGCTCAGGC ATTTCGGCTC GGTCGACCTG
ATCAGAACGG CTGGAGTCGA TGAACTCAGG GCTGCGGCAG GAAACAAAAC CGCAGCCCTT
CTTTACCGGT TCTACCATCC CCTCGAAGAG GGATAA
 
Protein sequence
MDSNPLHHSN PPVGSLPLDK VASLPSSPGV YQFKNAQGRV IYIGKAKNLR NRVRSYFRNP 
QQLFGKTLVM VGKIADIEVI ITSSEVEALI LENNLIKELK PRYNVNLKDD KTYPYLVITN
EPFPRILVTR QVKKDGSTWF GPYTEARQLR SILDFIGSIF PIRSCKLRLS PENISRGKFK
VCLDYHIHKC KGPCEGLLTE EEYLLMIVEI TRLLKGKTSA TIRSLNERML SFAKELKFEQ
AAELKTQIDS LKRYAERQKV VTSDTLDRDV FAVASRNDDG CGVVFKIREG KLLGSERLYM
NNTEGVSVQD LLARVVERYY LETCNLLPDE IFLQTELPAE EKETLENLLI SKISAEGKQK
RTIRLTVPII GEKAHLIQLC RENARHHLEE YLIQKQKRGE ALREHSGLIA LAELLHLPKT
PNRIECFDNS HFHGTDYVSS MVAFVHGKAK KSDYRKFKLK TVQGSDDYAA MHEVLTRRYS
GTLSVELPLP DLIVVDGGKG QLSTAVKVLV SLKLDIPVIG LAKRIEEIFT PHTSDPFNLP
KTSPALKLIQ QLRDEAHRFA VTYHRKLRTE RTLETELTTI QGIGEKTAQK LLRHFGSVDL
IRTAGVDELR AAAGNKTAAL LYRFYHPLEE G