Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_0708 |
Symbol | |
ID | 4569882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 807274 |
End bp | 808161 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639765306 |
Product | shikimate dehydrogenase |
Protein accession | YP_911187 |
Protein GI | 119356543 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCAAC CAGAAAAAAT TCTCGGCCTT ATCGGGCGAA ATATAGCCTA CTCACGCTCA CCCCTGATTC ATAATACAGC TTGCGATCTG CTCGCACTTC CCTATGTTTA CACGATTTTC AACATCGCAT CTGCTGACCT TATCGAGCCG GCTATTGCAG GAGCAAGAGC TCTCGGCATA GCCGGACTGA ACGTTACCAC TCCCTATAAA ACAACTGTTG TGCCTTTTCT TGACGAACTC TCTCCTGAAG CCGCGTCAAT CGGAGCAGTC AACACCATCG TCAACAACAA CGGTCATCTT GCCGGTTACA ATACCGATAT AGCCGGTTTT GCAGCACCCC TGCGCCCATA TGCCCAGCGC ATCAAGGGAA ATCCGGTCTC TGTTTTCGGT AATGGCGGCG CGGCACTTGC CGCAATTGAA GCATTCAGAA TTTTTTTTCA TCCCTGCTGC GTTTACCTGT TTGTCAGGGA CAGTGCCAAA GCAAGCGCAA TGCTCGAAAA TTATGTTCAC AGAGATATCG TAACGCTCTG TTTGATTGAG GAGCTTTTTT CCGGAGAGAG CGGTGCCATT GCAAAGATCC AGAGATCTCT TGTTATTGTA AACGCAACAC CAATAGGCAC TGCCGGTCGT CAGAACGAAA CAGAAACAAG CATTTTACCT CTTGACACGG AGTTACTGCA CCCTGATCAT ATCGTTTACG ATATGGTCTA CAATCCACTG TTCACGCCGC TCATCAAGGC GGCAAAAGCC AGCGGCGCTG CAACCATTTC AGGAATCGAG ATGCTGCTTG GACAAGCTGC GCGATCATTT GAACTCTGGA CAGGAAAAGA AATGCCACTT GAGCAAGTCA GAGCTGTTCT GATAAATAAT CTGCTCTCCT CTCCATAA
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Protein sequence | MMQPEKILGL IGRNIAYSRS PLIHNTACDL LALPYVYTIF NIASADLIEP AIAGARALGI AGLNVTTPYK TTVVPFLDEL SPEAASIGAV NTIVNNNGHL AGYNTDIAGF AAPLRPYAQR IKGNPVSVFG NGGAALAAIE AFRIFFHPCC VYLFVRDSAK ASAMLENYVH RDIVTLCLIE ELFSGESGAI AKIQRSLVIV NATPIGTAGR QNETETSILP LDTELLHPDH IVYDMVYNPL FTPLIKAAKA SGAATISGIE MLLGQAARSF ELWTGKEMPL EQVRAVLINN LLSSP
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