Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_0682 |
Symbol | |
ID | 4569836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 779681 |
End bp | 780244 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639765280 |
Product | vir region protein |
Protein accession | YP_911161 |
Protein GI | 119356517 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.246591 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAA AAAGCTTATG GAAAGGAATG ACGATCACAG GCATAATGAT GATGACTTGT TTTTCCTTTC TGGCTTCAGC GAATGAACAA ACTGTCGGTA TTGGCGAAAG ATTCGGAGGC GGCATCGTTT TTTATATTTT CCAACCCGGC GAACAAGGTT ATGTCGAAGG CGAACAGCAC GGTCTGATTG TCGCTCTGGA GGATCAGGGG CGTGGTGTTG AGTGGAGCAA CGTCACAACG GCTTCCGTTA GTGGAACAAC GACGGGATTA GGTGCCGGAC GTGACAATAC AACACTTATT ATTTCTCAGG ATGGCCATCA GAATAGCGCA GCAAAACTCT GTGAAGATTA TGTTTTTGAG GGATATAGCG ACTGGTATTT GCCAAGCAGT GAAGAACTGG ATAAATTATA TTCAAACAAA GGTTTGGTCT ATGGTTTTTC CGACGGGCAC TGGAGTTCGT CAGAAAGCGG CCCTGGAGAT GTCTGGGCTA ATCTCGACTG CGGTGTATCC CGCTACCACA TGAAAATGAT TGGTATTCAT GTTCGGGCAA TTCGTTCTTT TTAG
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Protein sequence | MKIKSLWKGM TITGIMMMTC FSFLASANEQ TVGIGERFGG GIVFYIFQPG EQGYVEGEQH GLIVALEDQG RGVEWSNVTT ASVSGTTTGL GAGRDNTTLI ISQDGHQNSA AKLCEDYVFE GYSDWYLPSS EELDKLYSNK GLVYGFSDGH WSSSESGPGD VWANLDCGVS RYHMKMIGIH VRAIRSF
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